Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4103 ATGGGTTTTTTGTTGAAAGAAGTTTTGAAGACTTTGTGTGGTAGTAATCAATGGTCTTATGCTGTGTTTTGGAAGATTGGTTGCAACAATTCTAAGCTATTAATATGGGAAGAATGCTATTATGAACCCTTGTCATGTCCTTCCCCTCACGGCATTGTTGGGATGCCAAATTTGCCTAATCCGAACGGGGAAGGGTGCTGGTTTTCTTCTGAGTCTCAATCGTCTCATCTAGGAATACAAGAGGAGGATAGAGTCTCTTCTTTGATTAGCAAAATGACGGTCAATAATTTAGTCATTGTTGCAGGTGAAGGTATAATTGGACGTGTTGCATTTACCAACAGTCATGAATGGATTCTCTTGAACAATTTTGCTAAAAGTGCATATCCACCTGAGGTATATGCTGAAATGCATCAGCAATTTTCAGCTGGAATGCAGACAGTAGCAGTAATTCCTGTGCTTCCTCACGGGGTTATTCAACTTGGTTCTTTCTATCCGATAATGGAGAATATGGGATTTGTGCATGAAGTAAAGAGCCTGATCTTGCAACTAGGGTGTATTCCTAATGCCCTTCTATCCGAGGACTATTCAGCTAAACTTTCACATGAAAGACTTCATGGACGTGCTACTTCCGGTGTGCCTGGTACATCAGTCATTACCTCAAATTCCACTCCTTCAGTGGTTAATGGCTCCAATCAGCAAAGTTATTCATTTCATGCTTCAAAGCCTATTGTTCAAAGACATGATAGAGTTGTGGAAGCTAAAGTAATACCCTCAAATTTCAATTCAAATCTGCAAAAGCATTCTGTTTCATATAACGGAAGATCTGAATTCAATAACTTAGCTGGTTCTGAGCCGTTTGGTCTATCAGGTCCAAGTGATTATAGCCTAAAATATATGGAACAACAAATCTTATCAGCAGTTGGGAATCAAGATAATGTTAATCCTTGTATTAATGTGTCAAGTTCCCTAAACATTTCTCAACTAAAAACGGACGGAAGCCATAATGTTGGTGGTGGCAGTACTTCATTTCTTAGAGGAATCCCAGTACACGGTGGGATGAATAGTTTATTGAGGACAAATCTGATTACTAGTTCAGAATCACTGAATGATAGTTCAAATTTGACTGGTCGATCAGGTGTCGTTCACATGCCTCTAGAATGTTCTGATCAGAAGATTCTTCCCGAAGTTTCAAACTTTGCTTCAAGAGGTCAAAAGATAGACTATGACACGCTTCAGGCCTCTAACATCACCTTTTTTAATCCGGCGGAACATGTGCCTATTAATAGTCATATCCCTGGTTTTGATCATGATTGCTTTCAGAAAGATGGTGGTACTAATCAATCTATGATGACAACGAATCCTAAACACGAGGAAACTTGTGCTCAACAATCTCCATCGGGTGGTGACGACCTGTTTGATATTTTAGGTGTTGATTTTAAAAACAAACTTCTCAAAGGACACTGGAATGAACTGTTTGCTGATGAATCAGATGCCAATGCTGAAAATATGGTTAAAAAGGAAATATCTACGAACAAAGAGGGTACAGATTCTGATTATTATTCAGTTAACGAATCAATGTTGGACAGTGGCATTTTTTCTGGCATGTCAACAGACAACCTCTTAGATGCTGTGGTCTCAAAGGCCCAACGTCCTTTGATACATAATTCGGATGACATGTCTTGCAAGACAACCTTGACCGGGAATAGTAGTATCACCTCTATTCCCTCTCGTGTTTGCAAGCAGGTTATGTCCGGTAATTTCAAAGAGGGTTTGTTTGGTTTTTCGAAGAATGGAGGTAAAACGGGAGCCTTAGAAACTAGATCTCTAAGGTCTGGTTGTAGCAAGGATGATACTGGAAACCTCTCTCAAACAACTACTATATGTGGTTCCCAACTTAGTTCATGGTTGGAGAATGGTGGCAATGTGAAGCATGAAAAGCGTGAAAATAGTGTTTCAACTGGATGCTCTAAGCGCCCGGACGAAGCTTGCAAACCTAATCGGAAAAGGCTTAAACCAGGTGAGAATCCCAGGCCTAGACCTAAAGATCGTCAAATGATTCAAGATCGTGTCAAAGAGTTACGAGAGATTGTTCCAAATGGAGCGAAGTGTAGCATAGATGCACTGCTGGAACGGACCATTAAGCATATGGGTTTCTTGCAAAGTGTGACAAAGCACGCCGACAAGCTGAAACAGACCGGGGATTCTAAGATCGTTAGTAACGAAGGTGGGCTGCTTTTGAAAGACAACTTTGTGGGAGGGGCTACATGGGCATATGAGGTTGGCTCCCAATCAATGGTTTGTCCGATTATAGTCGAAGATTTGAATCCGCCTCGTCAGATGCTAGTCGAGATGCTTTGCGAGGAACGCGGTTTCTTTCTAGAAATAGCTGACTTAATCAGAGGATTGGGCTTAACAATCTTAAAGGGGGTAATGGAAGCCCGCAACGACAAAATTTGGGCACGTTTCGTTGTTGAGGCAAACAGGGACGTAACGAGAATGGAAATATTTATGTCACTCGTTCGTCTTCTAGAGCAAACAATGAAGGGTAACGCGTCTTCATCGAATGCAATCGATGACATGATAGGTTACAACACTTTACCACAGAAGGCCTAA 2613 0.411 MGFLLKEVLKTLCGSNQWSYAVFWKIGCNNSKLLIWEECYYEPLSCPSPHGIVGMPNLPNPNGEGCWFSSESQSSHLGIQEEDRVSSLISKMTVNNLVIVAGEGIIGRVAFTNSHEWILLNNFAKSAYPPEVYAEMHQQFSAGMQTVAVIPVLPHGVIQLGSFYPIMENMGFVHEVKSLILQLGCIPNALLSEDYSAKLSHERLHGRATSGVPGTSVITSNSTPSVVNGSNQQSYSFHASKPIVQRHDRVVEAKVIPSNFNSNLQKHSVSYNGRSEFNNLAGSEPFGLSGPSDYSLKYMEQQILSAVGNQDNVNPCINVSSSLNISQLKTDGSHNVGGGSTSFLRGIPVHGGMNSLLRTNLITSSESLNDSSNLTGRSGVVHMPLECSDQKILPEVSNFASRGQKIDYDTLQASNITFFNPAEHVPINSHIPGFDHDCFQKDGGTNQSMMTTNPKHEETCAQQSPSGGDDLFDILGVDFKNKLLKGHWNELFADESDANAENMVKKEISTNKEGTDSDYYSVNESMLDSGIFSGMSTDNLLDAVVSKAQRPLIHNSDDMSCKTTLTGNSSITSIPSRVCKQVMSGNFKEGLFGFSKNGGKTGALETRSLRSGCSKDDTGNLSQTTTICGSQLSSWLENGGNVKHEKRENSVSTGCSKRPDEACKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMGFLQSVTKHADKLKQTGDSKIVSNEGGLLLKDNFVGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFVVEANRDVTRMEIFMSLVRLLEQTMKGNASSSNAIDDMIGYNTLPQKA* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4103 870 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 243 IPR043561 GO:0003700|GO:0006355
Tpr7g4103 870 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 245 367 IPR043561 GO:0003700|GO:0006355
Tpr7g4103 870 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 372 870 IPR043561 GO:0003700|GO:0006355
Tpr7g4103 870 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 372 870 - -
Tpr7g4103 870 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 245 367 - -
Tpr7g4103 870 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 243 - -
Tpr7g4103 870 MobiDBLite consensus disorder prediction 640 685 - -
Tpr7g4103 870 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 670 719 IPR011598 GO:0046983
Tpr7g4103 870 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 179 IPR025610 -
Tpr7g4103 870 MobiDBLite consensus disorder prediction 639 685 - -
Tpr7g4103 870 CDD bHLH_AtLHW_like 674 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4103 Tpr-Chr7 50058205 50064719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4103 467 867 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 51.843 2.13e-111 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4103 - - cam:101492357 1194.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4103 7 50058205 50064719 Tpr7g4103 7 50058205 50064719 ECH
Tpr7g4103 7 50058205 50064719 Tpr7g4103 7 50058205 50064719 PCT