Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4098 ATGGCACAATTACCTCCTAAGATTCCAAATATGTCACCTAGTTGGCCAGATTTTTCCATTCACCAACAAAATATTATGCCAAACATGTCACAACCTAATAACATTGTCACAACCACAAACAATAATCATCATCATAGTCAAAATCCTTCATGGGTGGATGAATTTCTCGACTTCTCGTCCGCAAGGCGAGGCGCTCACCGAAGGTCGGTGAGCGATTCTGTTACCTTCTATGAAACGCCAATGCTCAATGATTGTCCTAGTAAACAACATACCAACAATGATAATGAGTTTGACAAGTTTGATGATGAACAATTTTTGTCGATGTTCAACGATGAAATAGCCGGTGTTCATAATATGCCGCCGACATTGTCCTCGTCGAATCCTTCGAGTCCTTCGGATCAGAATTTTTTCAATGATGAGAATGAGACAAATAAACAAGAGAAGAAGGTGATGAAGAAAGAGGAAGGTTATGAGAAGCAATTGAAAAATGAACCGGATGAGGTTGAAAGCCAATGCAATCAAGAAAATTCACACCCTCAAAATAACAACAATTCTACTTCTTCTAATGATAGAATTACTGATCCAAAGAGAGTCAAAAGAATCTTGGCAAATAGGCAATCAGCACAAAGGTCACGTGTGAGGAAGCTGCAATACATATCAGAGCTTGAGAGAAGTGTAACTTCATTGCAGGCTGAAGTTTCAGTGCTATCTCCAAGAGTTGCATTTTTGGATCATCAACGCTTGCTTCTTAATGTTGATAACAGTGCTCTCAAGCAAAGAATTGCAGCTCTTGCTCAAGACAAAATTTTCAAAGATGCTCATCAAGAGGCACTGAAGAGGGAAATAGAGAGATTAAGACAAGTATATCACAATCAGAATCTGAAGAAGATTGAAAATGTTAATGGATCACCCTTACCATCTCCATCACAAAAGCCAATGTGTGATGCTCAAACAGAAAATGAACAACTTCTCAATGGAAATACATGTGCTGCAGTGGCCTCAAAAGATAGGGTGGAAGAACCAGTTGTGTCTGCTTTAATTTAA 1044 0.3889 MAQLPPKIPNMSPSWPDFSIHQQNIMPNMSQPNNIVTTTNNNHHHSQNPSWVDEFLDFSSARRGAHRRSVSDSVTFYETPMLNDCPSKQHTNNDNEFDKFDDEQFLSMFNDEIAGVHNMPPTLSSSNPSSPSDQNFFNDENETNKQEKKVMKKEEGYEKQLKNEPDEVESQCNQENSHPQNNNNSTSSNDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHNQNLKKIENVNGSPLPSPSQKPMCDAQTENEQLLNGNTCAAVASKDRVEEPVVSALI* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4098 347 MobiDBLite consensus disorder prediction 122 139 - -
Tpr7g4098 347 SMART brlzneu 192 256 IPR004827 GO:0003700|GO:0006355
Tpr7g4098 347 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 324 - -
Tpr7g4098 347 MobiDBLite consensus disorder prediction 140 171 - -
Tpr7g4098 347 Gene3D - 195 267 - -
Tpr7g4098 347 Coils Coil 275 295 - -
Tpr7g4098 347 MobiDBLite consensus disorder prediction 172 191 - -
Tpr7g4098 347 PANTHER BASIC LEUCINE ZIPPER 34 1 324 - -
Tpr7g4098 347 CDD bZIP_plant_RF2 197 247 IPR044759 GO:0003700|GO:0006355
Tpr7g4098 347 MobiDBLite consensus disorder prediction 122 195 - -
Tpr7g4098 347 Pfam bZIP transcription factor 196 240 IPR004827 GO:0003700|GO:0006355
Tpr7g4098 347 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 199 214 IPR004827 GO:0003700|GO:0006355
Tpr7g4098 347 SUPERFAMILY Leucine zipper domain 196 250 IPR046347 GO:0003700|GO:0006355
Tpr7g4098 347 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 194 246 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4098 Tpr-Chr7 49992127 49995914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4098 1 273 bZIP Transcription Factor Family AT3G58120 54.576 2.09e-92 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr7g4098 bZIP_1 3.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4098 - - cam:101507538 496.508