Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4087 ATGACTCAGTGTAGTTACCCTGAAAATAATCATCATAGTGTTCTTATGGAGAGGAGAAAAGATAGCTTAATAAGAACTTGTCCTACTTGTGGTCATCATATCAAATGCCAAGATCAGGGTGCTGGAATTCATGAGTTACCTGGATTACCTGCTGGAGTGAAGTTTGATCCTACTGATCAAGAGATTCTTGAACATTTGGAAGCAAAAGTGCGGTCTGATATTCAAATGCTTCATCCTTTAATTGATGAGTTCATTCCTACTCTTGAAGGAGAGAATGGAATCTGCTGTACTCATCCAGAGAAGTTACCAGGCGTTGGCAAAGACGGCCTGATCCGACATTTCTTTCATAGGCCATCAAAAGCATACACAACAGGAACCAGAAAAAGGAGAAAAGTGCACACAGATGAAGATGGAAGTGAAACAAGATGGCACAAAACAGGTAAAACAAGGCCGGTCTATATAAATGGCAAGTTAAAAGGTTACAAAAAAATCCTCGTGCTTTACACTAACTACAGAAAGCAGAGAAAGCCAGAGAAAACAAATTGGGTTATGCATCAATATCATCTTGGAAACAATGAAGAAGAGAAAGAAGGAGAATTAGTAGTTTCCAAAGTTTTCTACCAAACACAACCTAGACAATGTGGTTCATTGATGAAAGAATCATCATCATTTTCTGATCAAAAACTAATTAATGATAATCAAGGTGTGCATGAAGTGGTTAATCATAAAAACAGTGGATTTGTTGAATACTATAATACTTCTTTTATATCTTTTGATCAAGGGGAACAACATAGATCAAACAATGCTCAAGTGGTTTCTCATTTTCCTGTTCATGATGGTAATTCTTTCATTCCTTGA 858 0.3671 MTQCSYPENNHHSVLMERRKDSLIRTCPTCGHHIKCQDQGAGIHELPGLPAGVKFDPTDQEILEHLEAKVRSDIQMLHPLIDEFIPTLEGENGICCTHPEKLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEDGSETRWHKTGKTRPVYINGKLKGYKKILVLYTNYRKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCGSLMKESSSFSDQKLINDNQGVHEVVNHKNSGFVEYYNTSFISFDQGEQHRSNNAQVVSHFPVHDGNSFIP* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4087 285 ProSiteProfiles NAC domain profile. 49 208 IPR003441 GO:0003677|GO:0006355
Tpr7g4087 285 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 284 IPR044799 GO:0003700
Tpr7g4087 285 SUPERFAMILY NAC domain 44 208 IPR036093 GO:0003677|GO:0006355
Tpr7g4087 285 MobiDBLite consensus disorder prediction 128 143 - -
Tpr7g4087 285 MobiDBLite consensus disorder prediction 122 143 - -
Tpr7g4087 285 Gene3D NAC domain 58 212 IPR036093 GO:0003677|GO:0006355
Tpr7g4087 285 Pfam No apical meristem (NAM) protein 50 189 IPR003441 GO:0003677|GO:0006355
Tpr7g4087 285 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4087 Tpr-Chr7 49920133 49922544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4087 25 227 NAC Transcription Factor Family AT4G28500 77.451 2.15e-116 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr7g4087 NAM 7.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4087 - - gmx:100791648 511.916