Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4086 ATGAACTATAGCAAAATGATTGAACTATTATTCCTCATTCTCTCAATAATCTCTCCCACTCTCTCTCTCAACCAAGAAGGTCTCTTCCTTCTCCAAGCCAAACACAATCTCTCCGACCCTTCAAACTCTCTCTCCAACTGGTCTCCCCATGACTCCACTCCATGCAACTGGACTGGCATCCTCTGCAACAATCTCACAAACTCTGTCACTTCCATAAACCTCCCTAACTCCGATCTCTCCGGTCCTTTCCCGACTTCCCTCTGCCGTCTCCCTTCTCTCTCCCATCTCTCTCTCCCTAACAACAGCCTCAACTCCACTCTCCCCACCACCATCTCCACTTGCACCACTCTTCACCATCTAGACCTCTCTTTAAACCTCTTCTCCGGCGAACTTCCAAACACTCTCTCCAATCTCCCTAACCTCAAACAACTCAACCTCTCCTTCAACAACTTCTCCGGTAAAATCCCGCCAACCTTCGGCTTTTTCCGGAGACTTCAATCTCTCTCCCTTGTTAACAATCTTCTCACCGGAAACATACCTTCTTCTCTAAGCAACGTTTCATCTCTCAAAGAACTTCACCTTGCTTACAACAATTTCTTCTCAGAAATTCCACAAGAATTCGGAAACCTCACCAACCTTGAAATTCTATGGCTTTCCGGTTGCAATCTTGTGGGTCAAATTCCGGTTTCTCTACGAAAACTCGTTCGTCTTCAAAACCTCGATTTATCACGAAACATGCTCAACGGAACCATACCGGAACTTATGATCTCCGGTTTAACCAGCATTGTTCAAATCGAGCTTTTCCAAAACTCATTCTCCGGCGAGTTACCACGTGCCGGTGTATCGAATTTGACTCATTTGGAACGATTCGATGCTTCTGATAATGAGTTAACAGGAACGATTCCCGACGAGTTGTGTCGTTTGAAGAATCTGGGGTCTTTGAATTTGTACTACAATAAACTCAGCGGTTCTCTGCCGGAAAGTTTAGCTTCGTCGGAGAATTTATACGAGCTTCTTCTGTTCAACAACACACTCACCGGAAAGTTGCCAAGTGGCTTGGGAAACAATTCAAAGCTACAGTTGCTTGATGTTTCGTTTAATCAATTTTCCGGCGAGATTCCGGCGAGTTTATGTCGTCAGGGAAGTTTACAGGAACTGTTAATGATTCACAATTCATTTTCCGGTGAAATTCCGGCGAGTCTTGGAAACTGTTTGAGCTTAATGAGAGTTAGGTTTGGGAATAATAATCTCTCTGGTGTTGTTCCTTATGGACTTTGGGGTCTACCCCATATGTATCTACTTGAGCTTGTTGAAAATTCTCTTTCTGGGTCTATTTCTAATGCAATTTCAAGAGCAAATAATCTTTCAATTTTATTAATTTCAGGGAATAGGTTTAATGGGTCGATTCCGGAGTCAATCGGGTTGTTGGATAATCTCGGAGAGTTTGTTGCTAGTAGGAATAGTCTTACCGGTCAAATTCCGACCGGTATGGTTAAGTTAAGCCAGTTGGGTAGGCTTGTTCTTAGAGATAATCAATTTTCTGGCGAGATTCCTAATTGGGTTGGTGATTGGAAGAAGCTTAATGAGCTTGATTTGGCTAATAATAGGTTTGTTGGTAATATTCCAAGTGAATTAGGAACTTTGCCGGGGCTTAATTTTCTCGATCTTTCTGGTAATTTACTTTCTGGTGAAATTCCAATGGATCTGCAAAATTTGAAGCTTGATATTTTTAATCTTTCAAATAATAAGCTTTCTGGTGAAATTCCTCCTCTTTATGCAAATGAGAATTATAGGGAAAGTTTTTTAGGAAATACCGATTTATGTGCTGATCTTTCGGGATTGTGTCCGAATTTGGGTGAGAAGAGTAAGAATAGGAACTTTGTTTGGGTTTTTAGGTTCATATTTGTACTTGCTGGTGTTGTTTTAATTGTTGGGGTGGCATGGTTTTACTTCAAATTCCAAAATTTCAAGAAGATTAAGAAAGGTTTTTGTACATCGAAGTGGAGATCGTTCCATAAACTAGGGTTTAGCGAGTTTGAGATTGTTAAATTGATGAGTGAAGATAATGTAATAGGGAGTGGATCTTCTGGGAAGGTTTACAAAGTTGTGTTGAGTAATGGAGAGGTAGTTGCGGTGAAGAAATTATGGAGAGGAATTAAGATAGAAAGTGGAAATGTTAATGATCAAGAAAAAGATGAATTTGAAGTTGAAGTTGAAACATTAGGAAAGATTAGGCACAAGAACATTGTAAGGTTATGGTGTTGTTATAATAGTGGAGATAATAAACTCTTAGTTTATGAGTATATGCCTAATGGAAGTTTAGATGATTTGTTGCATAGTGGTAAGAAAAACTTGTTGGATTGGCCAACAAGGCTTAAAATTGCTGTTGATGCTGCTGAGGGACTTTCTTATTTGCATCACGATTGTGTTGTTCCTATTGTTCATAGGGATGTAAAATCTAGCAATATTTTGTTAGATGGAGAATTTGGTGCAAAAATTGCTGATTTTGGAGTTGCTAAATTTGTTAGAGGTGTCACCAATGGGACAGAAGAACCTATGTCTATGATTGCAGGATCTTGTGGTTACATTGCACCAGAATATGCTTATACTCTTAGGGTGAATGAAAAGAGTGACATTTATAGCTTTGGTGTAGTGATTTTGGAATTGGTAACTGGAAAACACCCTGTTGATCAAGAATATGGAGAAAAAGATTTGGTAAAATGGGTTTCTTCCAAATTGAATGAGGAAGGACATGATCAAGTGATTGATCCAACTCTTGATTCTAAGTATAAGGAAGAAATCAGCAAAGTACTCAACTTGGGGATTCTTTGCACAAGCTCACTTCCTATAAACCGTCCTTCAATGAGAAGTGTAGTGAAAATGCTGCAAGTAACAACAGTTGCTAAATCAAGAAGTGGAAAATTCTCTCCTTATTATCAAGAAGTAGTCTCTGACAATGATCATTAG 2967 0.3953 MNYSKMIELLFLILSIISPTLSLNQEGLFLLQAKHNLSDPSNSLSNWSPHDSTPCNWTGILCNNLTNSVTSINLPNSDLSGPFPTSLCRLPSLSHLSLPNNSLNSTLPTTISTCTTLHHLDLSLNLFSGELPNTLSNLPNLKQLNLSFNNFSGKIPPTFGFFRRLQSLSLVNNLLTGNIPSSLSNVSSLKELHLAYNNFFSEIPQEFGNLTNLEILWLSGCNLVGQIPVSLRKLVRLQNLDLSRNMLNGTIPELMISGLTSIVQIELFQNSFSGELPRAGVSNLTHLERFDASDNELTGTIPDELCRLKNLGSLNLYYNKLSGSLPESLASSENLYELLLFNNTLTGKLPSGLGNNSKLQLLDVSFNQFSGEIPASLCRQGSLQELLMIHNSFSGEIPASLGNCLSLMRVRFGNNNLSGVVPYGLWGLPHMYLLELVENSLSGSISNAISRANNLSILLISGNRFNGSIPESIGLLDNLGEFVASRNSLTGQIPTGMVKLSQLGRLVLRDNQFSGEIPNWVGDWKKLNELDLANNRFVGNIPSELGTLPGLNFLDLSGNLLSGEIPMDLQNLKLDIFNLSNNKLSGEIPPLYANENYRESFLGNTDLCADLSGLCPNLGEKSKNRNFVWVFRFIFVLAGVVLIVGVAWFYFKFQNFKKIKKGFCTSKWRSFHKLGFSEFEIVKLMSEDNVIGSGSSGKVYKVVLSNGEVVAVKKLWRGIKIESGNVNDQEKDEFEVEVETLGKIRHKNIVRLWCCYNSGDNKLLVYEYMPNGSLDDLLHSGKKNLLDWPTRLKIAVDAAEGLSYLHHDCVVPIVHRDVKSSNILLDGEFGAKIADFGVAKFVRGVTNGTEEPMSMIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKHPVDQEYGEKDLVKWVSSKLNEEGHDQVIDPTLDSKYKEEISKVLNLGILCTSSLPINRPSMRSVVKMLQVTTVAKSRSGKFSPYYQEVVSDNDH* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4086 988 Pfam Leucine rich repeat 163 223 IPR001611 GO:0005515
Tpr7g4086 988 ProSiteProfiles Protein kinase domain profile. 685 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4086 988 SUPERFAMILY L domain-like 37 370 - -
Tpr7g4086 988 SMART serkin_6 685 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4086 988 Gene3D Transferase(Phosphotransferase) domain 1 769 978 - -
Tpr7g4086 988 ProSitePatterns Protein kinases ATP-binding region signature. 691 714 IPR017441 GO:0005524
Tpr7g4086 988 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Tpr7g4086 988 Pfam Protein kinase domain 687 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4086 988 Gene3D Phosphorylase Kinase; domain 1 667 768 - -
Tpr7g4086 988 Gene3D Ribonuclease Inhibitor 259 617 IPR032675 -
Tpr7g4086 988 SUPERFAMILY Protein kinase-like (PK-like) 685 965 IPR011009 -
Tpr7g4086 988 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 970 - -
Tpr7g4086 988 SUPERFAMILY RNI-like 282 590 - -
Tpr7g4086 988 Gene3D Ribonuclease Inhibitor 184 258 IPR032675 -
Tpr7g4086 988 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Tpr7g4086 988 SMART LRR_typ_2 186 209 IPR003591 -
Tpr7g4086 988 SMART LRR_typ_2 90 114 IPR003591 -
Tpr7g4086 988 SMART LRR_typ_2 210 233 IPR003591 -
Tpr7g4086 988 SMART LRR_typ_2 138 161 IPR003591 -
Tpr7g4086 988 SMART LRR_typ_2 234 258 IPR003591 -
Tpr7g4086 988 SMART LRR_typ_2 308 331 IPR003591 -
Tpr7g4086 988 SMART LRR_typ_2 500 524 IPR003591 -
Tpr7g4086 988 SMART LRR_typ_2 548 579 IPR003591 -
Tpr7g4086 988 Gene3D Ribonuclease Inhibitor 23 182 IPR032675 -
Tpr7g4086 988 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 7 970 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4086 Tpr-Chr7 49911942 49915795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4086 19 986 Receptor kinase-like Gene Family AT1G28440 59.109 0.0 1123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr7g4086 Pkinase 9.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4086 - - gmx:100778128 1280