Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4083 ATGCTAGCTGTGTCACCATTAATGTGTAGCACAAGAGATGAAAGCCAAAGAGAAATGGAGGAGAATTTATCAATTGGAACATGTGATTTTGCTGATCTTTCCGAAGGAAACTTATTGGAAAGCATCAATTTCGAATTCGATGATGATTTCTTCGTATGCTTTGACGATGGAGATGTGTTACCGGATCTTGAAATGGACCCGGAAATGCTTGCTGAATTTTCCCTCAGCAGCGGTGAGGAATCGGAGATGAATTCATCGGTTACAATTGCGAATAGCAAATCTTTTGATGATGGGAATATAGTTAGTATTGAGAAAATAATTCAAGATGATGAGAAAGTAGGTTCTTCTTCAGATTCGGGTTCGAGCCGCATGGAGGAAATTGTTAGCAAAAGAGATGAATCTGTGGTGGTGAATCCATTGCCTAAGGGTGAGAAAGGAAGAAAATCATCATCTCAATCAAAAAATAATCATCAAGGGAAGAGAAAAGTGAAGGTGGATTGGACCCCAGAATTGCATAGAAGATTCGTACAAGCAGTGGAGCAGCTAGGTGTGGATAAGGCTGTACCTTCAAGAATTTTGGAAATTATGGGAATTGACTGCCTCACCCGCCATAACATTGCTAGTCACCTTCAAAAATATCGATCGCATAGGAAGCATTTGCTAGCACGCGAAGCTGAAGCAGCAAGTTGGAGTCAAAGAAGGCAAATGTTTGGAACAAGTAGAGGAGGAGTAGGAGGAAAGAGAGATATTGTGAATCATCATTGGGTTGCACCAACCATGGGTTTTCCTCCCATGACACCAGTACACCATTTTAGACCTCTACATGTATGGGGTCACCATCCTATGGATCAGTCCTATATGCACATGTGGCCTAAATATTCGCCGCACCAGCCATCAGCTAATTGGGCGGCACCTCCACAGGCAGCTCTGCCTCCTAATGCTTCGTATTGGCACCAACGAGCTCCAAATGCACCAACCGCAGGAACACCGTGTTTTCCACAGCCTCTGACAACAACGAGATTCGTCTCTCCGGCTATTCCAGGCATTCCACCACCCCATGCGATGTACCAAGTAGATCCCGTTGTTCTCGTCCCTGGCGGTCAACAATCTCCTCCGCCTCTATTAGACTTCCATCCGTCAAATGAGAGCATAGATGCAGCAATTAGTGATGTATTATCAAAACCATATTTACCATTGCCACTTGGCCTTAAAGCTCCAGCACTTGAAGGTGTGATGGGTGAATTACAGAGACAAGGAATTCCAAAAATTCCACCCTCTTGTGCTTGA 1287 0.4413 MLAVSPLMCSTRDESQREMEENLSIGTCDFADLSEGNLLESINFEFDDDFFVCFDDGDVLPDLEMDPEMLAEFSLSSGEESEMNSSVTIANSKSFDDGNIVSIEKIIQDDEKVGSSSDSGSSRMEEIVSKRDESVVVNPLPKGEKGRKSSSQSKNNHQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQRRQMFGTSRGGVGGKRDIVNHHWVAPTMGFPPMTPVHHFRPLHVWGHHPMDQSYMHMWPKYSPHQPSANWAAPPQAALPPNASYWHQRAPNAPTAGTPCFPQPLTTTRFVSPAIPGIPPPHAMYQVDPVVLVPGGQQSPPPLLDFHPSNESIDAAISDVLSKPYLPLPLGLKAPALEGVMGELQRQGIPKIPPSCA* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4083 428 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 428 - -
Tpr7g4083 428 MobiDBLite consensus disorder prediction 111 163 - -
Tpr7g4083 428 Pfam Myb-like DNA-binding domain 165 214 IPR001005 -
Tpr7g4083 428 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 428 IPR044825 GO:0003700|GO:0045893
Tpr7g4083 428 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 159 218 IPR017930 -
Tpr7g4083 428 SUPERFAMILY Homeodomain-like 160 219 IPR009057 -
Tpr7g4083 428 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 162 216 IPR006447 GO:0003677
Tpr7g4083 428 Gene3D - 159 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4083 Tpr-Chr7 49885447 49891440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4083 13 334 G2-like Transcription Factor Family AT5G44190 41.742 8.96e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tpr7g4083 Myb_DNA-binding 5.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4083 - - gmx:100775671 572.392