Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4062 ATGGATATGATGAGGGCTAATTTTGTTTTGATTATGTCAATGATCATGCTTAGTTTTTCATTGTCATATGGTTACAAATTTAACGTTGGTGGCAACGATGGTTGGGCAGTGAAACCTTCAAAATGGTATGGTCAATGGGCTGAGAATAATAGGTTCCTAATCAACGATACACTTTATTTTAAGTATACCAAGGGATCTGATTCAGTGTTGGTGGTAAGCAAAAAAGACTACTACTCATGCAACATAGGGAATGCGATCCAGAAATTGGACGGTGGAGATTCAACTTTCACATTTGACAAATCAGGTCCTTTTTTCTTCATTAGTGGAAACGTTGAAAATTGCAAACAGGGTGAAAAATTGATCGTTGTTGTTTTGTCACCAAATCATCGTAAACAAGGTCCATCATCAGCACCTTCACCATCATGGAATTCCCCGTCACCGGCATCGACACCTGTATCGAATGCTCCTTCACCAACATCGAAGGCTCCTACACCGGCATTGACTCCTTCACCGACACCTAAATCAAGTGCTCCTTCACCAACAACGAAGGCTCCTTCACCTGCATTGACTCCAGCACGGACACCAAAATCAAATGCTCCTTCACCAACATCTAAGGCTCCTTCACCTGCATTGACTCCAGCATCGACACCTAAATCAAATGCTCCTTCACCAACATCTAAGGCTCCTTCACCAACATCGACTCCGGCATCCAATGCTCCTTTACCAACATCAAAGACTCCTTCACCATTATATACACCGCCATCGGATGTTCCTTCACCAAAATCTCCGACCCCATCTCCTGCTCAGTCGGGTTCTACAAGGTTCGGTGGTTTTGGTGTTGGATTGGTGGTTGCCTTGATCATTGGAAGCTTTGCTATTTAA 882 0.4342 MDMMRANFVLIMSMIMLSFSLSYGYKFNVGGNDGWAVKPSKWYGQWAENNRFLINDTLYFKYTKGSDSVLVVSKKDYYSCNIGNAIQKLDGGDSTFTFDKSGPFFFISGNVENCKQGEKLIVVVLSPNHRKQGPSSAPSPSWNSPSPASTPVSNAPSPTSKAPTPALTPSPTPKSSAPSPTTKAPSPALTPARTPKSNAPSPTSKAPSPALTPASTPKSNAPSPTSKAPSPTSTPASNAPLPTSKTPSPLYTPPSDVPSPKSPTPSPAQSGSTRFGGFGVGLVVALIIGSFAI* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4062 293 CDD OsENODL1_like 25 125 IPR041846 -
Tpr7g4062 293 Gene3D - 25 136 IPR008972 -
Tpr7g4062 293 MobiDBLite consensus disorder prediction 246 265 - -
Tpr7g4062 293 MobiDBLite consensus disorder prediction 146 161 - -
Tpr7g4062 293 MobiDBLite consensus disorder prediction 131 272 - -
Tpr7g4062 293 Pfam Plastocyanin-like domain 35 117 IPR003245 GO:0009055
Tpr7g4062 293 MobiDBLite consensus disorder prediction 162 180 - -
Tpr7g4062 293 PANTHER EARLY NODULIN-LIKE PROTEIN 1 9 195 - -
Tpr7g4062 293 MobiDBLite consensus disorder prediction 181 245 - -
Tpr7g4062 293 PANTHER BLUE COPPER PROTEIN 9 195 IPR039391 GO:0009055
Tpr7g4062 293 PRINTS Proline rich extensin signature 139 151 - -
Tpr7g4062 293 PRINTS Proline rich extensin signature 157 173 - -
Tpr7g4062 293 PRINTS Proline rich extensin signature 178 190 - -
Tpr7g4062 293 PRINTS Proline rich extensin signature 191 212 - -
Tpr7g4062 293 ProSiteProfiles Phytocyanin domain profile. 25 126 IPR003245 GO:0009055
Tpr7g4062 293 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4062 Tpr-Chr7 49747936 49749414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4062 10 193 Phytocyanin Superfamily AT5G53870 44.503 2.22e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4062 - - mtr:MTR_2g090575 174.481