Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4047 ATGGCTTCAGGACCATCAATTCACGGCAACTACATCTCCGAGGGACATAATTTGGGTTCCGATGATGTTTTTTGTTCATACGATGATTATACCAACGAGGGTTCTTCTTGTGCCACTCACATCGATTCTAGTAAGGATTTTCACATTTCAAGGATGGCAAAAACTTCAACATTTCCTGCTACTGTCATTAATTCACCTGAAGGTTCGTTAAGCCAAGATGTTATTGCAACAACTGTTGAGAAGAGTATGAAAGCATGTACCGCCAACCTTATGCGGTTTCTTGAAGGAATTAGTTCAAGGCTATCACAATTGGAATTATATTGTTACAATCTTGATAAATCAATTGGAGAAATGAGATCTGAGTTAACTAGTGACCACGAGGAGGCAGATTTAAAACTCAAATCTCTTGACAAACACATGCAGGAAGTACTCAGGTCACTACAAATTTTAAGAGACAAACAAGAGCTAGTTGAGACTCAGAAAGAATTAGCCGTACTTCAACTTGCTCGGAAAGGATCACATTCCTCAATCCACTCACAGTCAAATGAGGAGAAATTTTCCTCCCCAGCTTCCATAGAACAGAAAAGAACTGATAATGCATCTCGTACATCACCTGATCCACATAACCAGCAGCTAGCTCTTGCCCTTTCTCATCAAGTTGCATACCAGCAACCGCCTATACCCCCGTCATCTCGAGCTTCATCCCCAAATGTGACCCAAACCACGCAACAACCTCCTTATTACATGCTGCCCGCGCCTTCCCCCAACCCACCAGTCACATCACAACTTCCTCAGAATCAGTATTTTCCTACTGATCCGCAGTATCGATATCATCATCCACCAACATCGTCTCAAGTAACCCAGTCCCTGACTGCGCAACAATTTTCTCAGTATCAGCAGCAGCCACAACAGCAATGGCCTCAACAGTTACCTCAGCAGGTACAACCTCTGCAACCACCCTCAATGAACTCTCAAATGAGACCTCCATCAGTAAATGCTTACGCTCCGTACCTTACAAGCCAAGCTTCAAGTCCACTTCCCACCGACACATTGCCGAACAGCATGCCAATTCAAAAGCCATATTCAGGGATTCCAACCCAAATCAAGGGACACTATCCATCCCAACCAGGTAATCCGTATGGAACTAGTGGGGTCCACAACACACCTCCTCCTGCGAGTGCATACGTGATGCATGAAAGTGAGGGTGGCAGAGTAAATTACCCTCCGCAACCTTCTCAATCTGCTCAAGGTGTATATCCTCCTCAAAGTGCTTCCGTTCAGAATCCTGCACTGCAGAATCTACCAGTGAGAAATCCTAGCCAGCCACAACTTGTCCGCAGCCACCCTTACAATGAGTTGATTGAGAATTTGGTGAGTATGGGAGTTAGAGGCGATCTTGTGGTAAGCATTATTCAGAGGTTGGAGGAAACTGGACAGCCTGTAAATTTTAACTCTGTACTTGACAGGTTGAATGTACATAGTTCATTGGGTCCCCAGAGGGGATGGTCAGGGTGA 1515 0.4488 MASGPSIHGNYISEGHNLGSDDVFCSYDDYTNEGSSCATHIDSSKDFHISRMAKTSTFPATVINSPEGSLSQDVIATTVEKSMKACTANLMRFLEGISSRLSQLELYCYNLDKSIGEMRSELTSDHEEADLKLKSLDKHMQEVLRSLQILRDKQELVETQKELAVLQLARKGSHSSIHSQSNEEKFSSPASIEQKRTDNASRTSPDPHNQQLALALSHQVAYQQPPIPPSSRASSPNVTQTTQQPPYYMLPAPSPNPPVTSQLPQNQYFPTDPQYRYHHPPTSSQVTQSLTAQQFSQYQQQPQQQWPQQLPQQVQPLQPPSMNSQMRPPSVNAYAPYLTSQASSPLPTDTLPNSMPIQKPYSGIPTQIKGHYPSQPGNPYGTSGVHNTPPPASAYVMHESEGGRVNYPPQPSQSAQGVYPPQSASVQNPALQNLPVRNPSQPQLVRSHPYNELIENLVSMGVRGDLVVSIIQRLEETGQPVNFNSVLDRLNVHSSLGPQRGWSG* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4047 504 MobiDBLite consensus disorder prediction 280 326 - -
Tpr7g4047 504 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 367 - -
Tpr7g4047 504 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 365 502 - -
Tpr7g4047 504 MobiDBLite consensus disorder prediction 221 242 - -
Tpr7g4047 504 MobiDBLite consensus disorder prediction 172 209 - -
Tpr7g4047 504 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 367 - -
Tpr7g4047 504 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 365 502 - -
Tpr7g4047 504 MobiDBLite consensus disorder prediction 171 209 - -
Tpr7g4047 504 Coils Coil 133 153 - -
Tpr7g4047 504 Pfam UBA-like domain (DUF1421) 450 494 IPR010820 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4047 Tpr-Chr7 49636788 49640028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4047 64 194 Trihelix Transcription Factor Family AT5G14540 35.115 2.08e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4047 - - aip:107610486 556.599