Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4036 ATGCCTCAACTTAAGCTACTTTTCATTCTTCTTCACACTGTAAACATAATTATATGTTGTGTTTCCACTACTGAATTTGTCTATAATACAAACTTCAACTCAACAAATATTAGCCTATATGGAAATGCAACCATTCAAAATTCCATTCTTACTCTCCTTAATGATACTTCCACTTCCTTCTCAATAGCTCGTGCTTTTTACCCTCACAAAGTACCTACAAAACCACCAAACTCTTCCACACTTCTCCCCTTTGCTACTTCCTTCATTTTCGCGGTTTCCCCTACCAAACACTTTATCCCAGGACATGGCTTTGCCTTCATATTCACATCTTCAAGAGATCTAAATGGAACAACATCAACCGAGTATATCGGTTTACTCAATTTCAACAATGATGGTAACTCTAACAACCATGTTTTTGGAGTTGAATTTGATATTGTTAAAAACGAACAATTCAACGATACAAATGATAATCATGTTGGTATTGACGTAAACTCGCTTACATCTTTAACTTCACATGAGGCTGGCTACTGGGGTGGAAAATATGGCAATGAATTTAAGGTGTTGAAGATGAAAAGTGGAGAAAACTATCAAGTATGGATTGAGTTTAACCATTCTCGTCTAAACGTTACAATGGCTCGGGCAGGGCGAAAGAGGCCTCATGTGCCTCTTATCAGTATGAATCTTAACCTTTCTGGGGTTCTTATGGATGAAACTTATGTTGGATTCTGTGCAGCCAATGGGGTGAAAAAAGATAGTGTTAAGATTCTTGCTTGGAGCTATAGTAATAAGAATTTTTCAATTGGTGATGCTTTAGTTACACACAACTTGGCTTCATTTGTCCCTCAAAAAGGATGGTTTTCTGGAGGAAATGCTATAGCTGTAGAAATAACTAGTGTTGTGTGTGTATTAATTATCATTGGTTGTGCTGCGTTATTCATTCTCTATAGGGGAAATAAAGAAGAAGAGATTGAAGATTGGGAAATAGAGTATTGGCCACATAGGATTAGTTTCCAAGAGATTCATGCAGCAACAGGAGGGTTCTCTGAAGAGAATGTGGTTTATGTAACAGGGAACAAAAGTGTACATAAAGGGATGTTGCAAGGAGTTGAAGTCGCGGTCAAGAGAATCCCTCACCAAAGAGAAGGGATGAGAGAGTTTTTGGCTGAGGTTTCAAGCATAGGAAGATTGAAACACAGAAATTTAGTAGGATTTCGAGGTTGGTGCAAAGAAGACAAAGAAAACTTGATTCTAGTGTATGATTTCATGAACAATGGAAGTTTAGACAAATGGATATTTGAGTGCGAAGAAGGAAAGATGCTAACATGGGAAGAGAGGGTTAAAGTTTTGAAAAATGTAGCCGTGGGGATTCTATACATGCATGAAGATTGGGAAGTTACGGTCTTGCATAGGGATATCAAAGCAAGCAATGTTCTACTTGACAAGGACATGAATGCTAGATTGGGGGATTTTGGTTTGGCTCTTATGCATGAGCATCATGGAGAAGTGGCTAGTACAACGAAAATACTAGGGACATTAGGATACATTGCTCCGGAAGTGATTCAAATAGGAAGAGCGTCGACTATGTCTGATGTGTTTGGCTTTGGAATATTGGTCTTGGAAGTAATTTGCGGACGAAGACCTATTGAAGAACATAAGCCAGGGCTAATCGAATGGGTGGAGTCCCTAATGGTGCTCGATCAATTGCACAATGCTATTGATGAAAGGTTAAAGAAAAAAGGAGGATACCCTATTGAGGAAGCTGAGAGACTGCTACATTTGGGTTTGTTGTGTTCAAATTCAGACCCTAGTGTTAGACCAACAATGAGACAGATTGTGAAAATGTTGGAGGGAGATGTCGACAGCATCGAATCTGATGAAGAAAATATGGAAACAAGTTTGCTTAGAAGAATAAAATCAGCTGCAATGTGGCCTAGAACTGAAAGTGGACTTCAAAACAAAGATCACCCTACTTTTGAAGAAGTTCTAATGTTCCGTTATAATTCTAAGTCGTCTACAAGTGGCTCAAGTTCCATTCCGCAAGGACCACAATCAGATTCAGATATCATTCGAGATGGACCATAA 2082 0.3871 MPQLKLLFILLHTVNIIICCVSTTEFVYNTNFNSTNISLYGNATIQNSILTLLNDTSTSFSIARAFYPHKVPTKPPNSSTLLPFATSFIFAVSPTKHFIPGHGFAFIFTSSRDLNGTTSTEYIGLLNFNNDGNSNNHVFGVEFDIVKNEQFNDTNDNHVGIDVNSLTSLTSHEAGYWGGKYGNEFKVLKMKSGENYQVWIEFNHSRLNVTMARAGRKRPHVPLISMNLNLSGVLMDETYVGFCAANGVKKDSVKILAWSYSNKNFSIGDALVTHNLASFVPQKGWFSGGNAIAVEITSVVCVLIIIGCAALFILYRGNKEEEIEDWEIEYWPHRISFQEIHAATGGFSEENVVYVTGNKSVHKGMLQGVEVAVKRIPHQREGMREFLAEVSSIGRLKHRNLVGFRGWCKEDKENLILVYDFMNNGSLDKWIFECEEGKMLTWEERVKVLKNVAVGILYMHEDWEVTVLHRDIKASNVLLDKDMNARLGDFGLALMHEHHGEVASTTKILGTLGYIAPEVIQIGRASTMSDVFGFGILVLEVICGRRPIEEHKPGLIEWVESLMVLDQLHNAIDERLKKKGGYPIEEAERLLHLGLLCSNSDPSVRPTMRQIVKMLEGDVDSIESDEENMETSLLRRIKSAAMWPRTESGLQNKDHPTFEEVLMFRYNSKSSTSGSSSIPQGPQSDSDIIRDGP* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4036 693 Gene3D Transferase(Phosphotransferase) domain 1 422 640 - -
Tpr7g4036 693 Pfam Protein kinase domain 366 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4036 693 Gene3D - 22 268 - -
Tpr7g4036 693 PANTHER - 1 678 - -
Tpr7g4036 693 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 263 IPR013320 -
Tpr7g4036 693 Gene3D Phosphorylase Kinase; domain 1 313 421 - -
Tpr7g4036 693 MobiDBLite consensus disorder prediction 669 693 - -
Tpr7g4036 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Tpr7g4036 693 ProSiteProfiles Protein kinase domain profile. 300 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4036 693 Pfam Legume lectin domain 24 263 IPR001220 GO:0030246
Tpr7g4036 693 SUPERFAMILY Protein kinase-like (PK-like) 323 616 IPR011009 -
Tpr7g4036 693 SMART serkin_6 354 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4036 693 PANTHER LECTIN RECEPTOR KINASE 1 678 - -
Tpr7g4036 693 CDD lectin_legume_LecRK_Arcelin_ConA 24 261 IPR001220 GO:0030246
Tpr7g4036 693 MobiDBLite consensus disorder prediction 669 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4036 Tpr-Chr7 49528927 49531446 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4036 21 563 Receptor kinase-like Gene Family AT4G04960 52.857 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr7g4036 Pkinase 3.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4036 - - mtr:MTR_2g090410 1051.97