Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4035 ATGCCTCAACTTAAGCTACTTTTCATTCTTCTTCACACTGTAAACATAATTATATGTTGTGTTTCCACTACTGAATTTGTCTATAATACAAACTTCAACTCAACAAATATTAGCCTATATGGAAATGCAACCATTCAAAATTCCATTCTCACTCTCCTTAATGATACTTCCACTTCCTTCTCAATAGCTCGTGCTTTTTACCCTCACAAAGTACCTACAAAACCACCAAACTCTTCCACACTTCTCCCCTTTGCCACTTCCTTCATTTTCGCGGTTTCCCCTACCAAACACTTTATCCCAGGACATGGCTTTGCCTTCATATTCACACCTTCATCAAGAGGTCTAAATGGAACAACATCAACCGAGTATATCGGTTTACTCAATTTCAACAATAATGGTAACTCTAACAACCATGTTTTTGGAGTTGAATTTGATATTGTTAAAAACGAACCATTCAACGATACAAATGATAATCATGTTGGTATTGATGTAAACTCGCTTACATCTTTAACTTCACATGAGGCTGGCTACTGGGGTGGAAAATATGGCAATGAATTTAAGGCGCTGAAGATGAAAAGTGGAGAAAACTATCAAGTATGGATTGAGTTTAACCATTCTCGTCTAAACGTTACAATGGCTCGGGCAGGGCGAAAGAGGCCTCATGTGCCTCTTATCAGTATGAATCTTAACCTTTCTGGGGTTCTTATGGATGAAACTTATGTTGGATTCTGTGCAGCCAATGGGGTGAAAAAAGATAGTGTTAAGATTCTTGCTTGGAGCTATAGTAATAAGAATTTTTCAATTGGTGATGCTTTAGTTACACACAACTTGGCTTCATTTGTCCCTCAAAAAGGATGGTTTTCTGGAGGAAATGCTATAGCTGTAGAAATAACTAGTGTTGTGTGTGTATTAATTATCATTGGTTGTGCTGCGTTATTCATTCTCTATAGGGGAAATAAAGAAGAAGAGATTGAAGATTGGGAAATAGAGTATTGGCCCCATAGGATTAGTTTCCAAGAGATTCATGCAGCAACAGGAGGGTTCTCTGAAGAGAATGTGGTTTATGTAACAGGGAACAAAAGTGTACATAAAGGGATGTTGCAAGGAGTTGAAGTTGCGGTCAAGAGAATCCCTCACCAAAGAGAAGGGAAGAGAGAGTTTTTGGCTGAGGTTTCAAGCATTGGAAGATTGAAACACAGAAATTTAGTAGGATTTCTAGGTTGGTGCAAAGAAGACAAAGAAAACTTGATTCTAGTTTATGACTTCATGAATAATGGAAGTTTAGACAAATGGATTTTTGAGTGTGAAGACGGAAAGATGCTCACATGGAAAGAAAGGATTCAAGTTTTGAAAAATGTAGCCACGGGGATTCAATACCTGCACGAAGGTTGGGAAGTTAAGGTCTTGCATAGGGATATTAAAGCAACTAATGTTCTACTTGACAAGGACATGAATGCTAGATTGGGTGATTTTGGTTTGGCTCTTATGCATGAGCATCATGGACAAGTCGCTAGCACAACGAAAGTACTAGGAACATTAGGATACATTGCTCCGGAAGTGATTCGGACAGGAAGAGCATCGACTATGTCTGATGTGTTTGGTTTTGGAATATTGGTGTTGGAAGTAATTTGCGGGCGAAGACCCATTGAAGAAGATAAACCAGGACTAATTGAATGGGTGGAATCCCAAATGGTGCTTGGCCAATTGCACAATGCTGTTGATGAAAGGTTGAAGGCTAAAGGAGGATACCCTATTGAAGAAGCAGAGAGATTGCTTCACTTGGGTTTATTGTGTTCAAATTCAGACCCTAGTGTTAGACCAATAATGAGGCAGGTTGTGAAAATGTTGGAGGGAGAAATGCATAACACTGAATCTGATGAAGAAAATATGGAGAAAGGTTTACTTCGAAGAATAAAATCAGCTGCAATGTGGACTAGAACTGAAAGTGGACTTCGATACAAAAATCACCCTACTTTTGAAGATATTAAAATGTTTAGTTATCACTCTGAGAGAACTACAAGTGTCTCAAGTTCCATTCCACAAGTATCACAATCAGAATCAGATTCAGATATCATTCGGGAAGGCTGGCAATGTTGTAGATTTTAG 2106 0.3856 MPQLKLLFILLHTVNIIICCVSTTEFVYNTNFNSTNISLYGNATIQNSILTLLNDTSTSFSIARAFYPHKVPTKPPNSSTLLPFATSFIFAVSPTKHFIPGHGFAFIFTPSSRGLNGTTSTEYIGLLNFNNNGNSNNHVFGVEFDIVKNEPFNDTNDNHVGIDVNSLTSLTSHEAGYWGGKYGNEFKALKMKSGENYQVWIEFNHSRLNVTMARAGRKRPHVPLISMNLNLSGVLMDETYVGFCAANGVKKDSVKILAWSYSNKNFSIGDALVTHNLASFVPQKGWFSGGNAIAVEITSVVCVLIIIGCAALFILYRGNKEEEIEDWEIEYWPHRISFQEIHAATGGFSEENVVYVTGNKSVHKGMLQGVEVAVKRIPHQREGKREFLAEVSSIGRLKHRNLVGFLGWCKEDKENLILVYDFMNNGSLDKWIFECEDGKMLTWKERIQVLKNVATGIQYLHEGWEVKVLHRDIKATNVLLDKDMNARLGDFGLALMHEHHGQVASTTKVLGTLGYIAPEVIRTGRASTMSDVFGFGILVLEVICGRRPIEEDKPGLIEWVESQMVLGQLHNAVDERLKAKGGYPIEEAERLLHLGLLCSNSDPSVRPIMRQVVKMLEGEMHNTESDEENMEKGLLRRIKSAAMWTRTESGLRYKNHPTFEDIKMFSYHSERTTSVSSSIPQVSQSESDSDIIREGWQCCRF* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4035 701 Gene3D - 22 269 - -
Tpr7g4035 701 Gene3D Phosphorylase Kinase; domain 1 314 422 - -
Tpr7g4035 701 SMART serkin_6 355 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4035 701 CDD lectin_legume_LecRK_Arcelin_ConA 24 262 IPR001220 GO:0030246
Tpr7g4035 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Tpr7g4035 701 Pfam Legume lectin domain 24 264 IPR001220 GO:0030246
Tpr7g4035 701 CDD STKc_IRAK 357 618 - -
Tpr7g4035 701 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 264 IPR013320 -
Tpr7g4035 701 SUPERFAMILY Protein kinase-like (PK-like) 324 618 IPR011009 -
Tpr7g4035 701 ProSiteProfiles Protein kinase domain profile. 301 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4035 701 PANTHER - 1 675 - -
Tpr7g4035 701 Pfam Protein kinase domain 367 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4035 701 Gene3D Transferase(Phosphotransferase) domain 1 423 642 - -
Tpr7g4035 701 PANTHER LECTIN RECEPTOR KINASE 1 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4035 Tpr-Chr7 49514261 49517161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4035 21 564 Receptor kinase-like Gene Family AT4G04960 53.119 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr7g4035 PK_Tyr_Ser-Thr 8.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4035 - - mtr:MTR_2g090410 1033.09