Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4020 ATGAGTGAGATGAGATCTACTTCACTGTTCAAGATAATGAAATTGAAAATCCATATACAAGTTCTTTTTGGATTGATGTTGATCTGTATAGTACAGTTTTCACTTGCTGCTACTAATCCCTCTGATGTTGCTGCAATTAATAGATTATATGCTGCATTGGGCAATCCTGTTCTTCCTGGGTGGGTTGCTAGTGCGGGAGATCCGTGCGGAGAAGCGTGGCAAGGCGTTCAATGTAATGATTCACTCATACAAGAAATAACTCTGATTGGTGCAAATTTGGGAGGAGAACTTGGCGATAGCTTGGGAACATTTGTTTCTATCAAATCAATATCTCTAAGCAACAACCACATCGGAGGAATTATTCCAACAAGTTTGCCAGCTACCTTGCAAACGCTTTTTCTTTCGGGTAACCAGTTAACCGGAAGTATTCCACCCACTTTATCCACATTGACAGAACTTACTGCGTTGTCTCTTAATGATAATCAGTTGACTGGGGAAATACCAGATGCCTTTCAGTCTCTTACGCGATTGACCAATCTAGATTTATCTCATAATAATTTGAGTGGAGAATTGCCTCCATCTGCAGAGAATTTATCAGCTGTGACGACTTTAAATTTACAGAACAACAGCCTGTCTGGGACACTCGATGTTTTACAAGACCTTCCACTGACAGATTTGAATGTTGAGAACAACCAGTTTTCTGGAGCAATACCTCCAAAGTTGTTAAGCATCACCAACTTCAGAAAAGATGGAAACCAATTTGACCTTACTGGTAATGATACTATAGCTCCATCTCGTCCACCTCATTCTCCAGTTACAGCATCGCCATCAGGAACTGTGGTTCCTGGGACGCCATCTTCTGGACGTGTACCTAGTGGACGTGTACCTACTACTACTAAACCGGCTGATGGACCAACTGCATCAAAAGAATCAAGTTCCGGGAAATCGAAAAAAAACACCAAAAGAGTGATATGGATAACTATTTCTGGTGTATTGGGGTTTATAATTTTGGCACTGGCACTTGTTCTCTTTCTTCCAAGATGTTGCAAAAGGGAACGAGGCGAAAGAACCTCCAAGCAACATCAGATTGGAGCATATGGAGGCGAAAGAACGAATCCTTGGAATAATGGGGCACTAGTCCAACCACCTAGTCAAACTGAGAAAGGACCAAAAGTGGCTGTTGCAAGGCCAAAAGAGAATCCTCGAGTAGTGCAAGATGAACCAAAAATGGAAACACTGCCGAAGCTATTAAGTCACAATATAGATATGAGTGCACTAGATGTAGATTCAATGCCACCTTCACCCCCACGTCCTCCTCCACCTCCACCTCCTGCTCCACCACTTGCCGCTGAGAAGGTGATTGTCGAGCCAACCACTTCCGCTGGAGGGGCTAACATCAATCCTTCCAAAAGAAGTGTTTTTCCGCCCACCTTTGCAAAATCTTTCACCATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGACAATCTTATAGGATTAGGCATGTTGGGGAGTGTATATAGAGCGGAGCTTCCTAATGGGAAGATACTTGCTGTGAAGAAACTAGACAAGAGAGTTTCCGATCACCAAGAAGATGATGAGTTTCTTGAATTGGTAAACAATATTGACAGACTTCGGCATGCAAATATTGTCGAGCTTATCGGTTACTGCATAGAGCATGGCCAAAGGCTTCTGATCTATGAATACTGCAGTAATGGGTCGATGTACGAAGCACTTCATTCAGATGATGAATTCAAAACAACACTGTCTTGGAATGCTCGCATTCGGATAGCACTTGGAGCAGCCAGAGCCTTAGAGTACTTGCATGAGCAATGTCAGCCACCTGTTATACACAGAAATTTCAAGTCTGCTAACATTCTCCTCGATGAAGATCTATCCGTGCGTGTATCTGATTGTGGTTTGGCTCCATTAATAACTAAAGGCTCTGTACGTCAGCTCTCAGGGCAGCTGCTAGCAGCTTATGGATACGGGGCTCCAGAATTTGAGTCAGGAATTTATACTTACCAGAGTGATGTGTACAGCTTTGGAGTGGTTATGTTAGAACTTTTGACCGGTCGTCAGTCCTATGACAGGAAACGCCCTCGAGGTGAGCAGTTTCTTGTAAGATGGGCAATTACTCAACTTCATGATATTGATGCATTATCAAGGATGGTTGATCCTTCTCTAAATGGAGCTTACCCTGCCAAATCTTTGTCAAATTTCGCAGACATTATTTCTAGATGTGTTCAGTCGGAGCCGGAATTTAGGCCAGCAATGTCCGAGGTTGTCTTGTACTTGCTAAATATGATAAGGAGGGATTCTCAACAAAATGAATCAAATGAAAGATGA 2355 0.4268 MSEMRSTSLFKIMKLKIHIQVLFGLMLICIVQFSLAATNPSDVAAINRLYAALGNPVLPGWVASAGDPCGEAWQGVQCNDSLIQEITLIGANLGGELGDSLGTFVSIKSISLSNNHIGGIIPTSLPATLQTLFLSGNQLTGSIPPTLSTLTELTALSLNDNQLTGEIPDAFQSLTRLTNLDLSHNNLSGELPPSAENLSAVTTLNLQNNSLSGTLDVLQDLPLTDLNVENNQFSGAIPPKLLSITNFRKDGNQFDLTGNDTIAPSRPPHSPVTASPSGTVVPGTPSSGRVPSGRVPTTTKPADGPTASKESSSGKSKKNTKRVIWITISGVLGFIILALALVLFLPRCCKRERGERTSKQHQIGAYGGERTNPWNNGALVQPPSQTEKGPKVAVARPKENPRVVQDEPKMETLPKLLSHNIDMSALDVDSMPPSPPRPPPPPPPAPPLAAEKVIVEPTTSAGGANINPSKRSVFPPTFAKSFTIASLQQYTNSFSQDNLIGLGMLGSVYRAELPNGKILAVKKLDKRVSDHQEDDEFLELVNNIDRLRHANIVELIGYCIEHGQRLLIYEYCSNGSMYEALHSDDEFKTTLSWNARIRIALGAARALEYLHEQCQPPVIHRNFKSANILLDEDLSVRVSDCGLAPLITKGSVRQLSGQLLAAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDRKRPRGEQFLVRWAITQLHDIDALSRMVDPSLNGAYPAKSLSNFADIISRCVQSEPEFRPAMSEVVLYLLNMIRRDSQQNESNER* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4020 784 ProSiteProfiles Leucine-rich repeat profile. 176 198 IPR001611 GO:0005515
Tpr7g4020 784 SUPERFAMILY L domain-like 38 246 - -
Tpr7g4020 784 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 26 783 - -
Tpr7g4020 784 Gene3D Phosphorylase Kinase; domain 1 464 571 - -
Tpr7g4020 784 ProSiteProfiles Protein kinase domain profile. 494 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4020 784 MobiDBLite consensus disorder prediction 353 375 - -
Tpr7g4020 784 MobiDBLite consensus disorder prediction 381 400 - -
Tpr7g4020 784 PANTHER OS01G0253100 PROTEIN 26 783 IPR045271 GO:0004714|GO:0006468
Tpr7g4020 784 SUPERFAMILY Protein kinase-like (PK-like) 471 768 IPR011009 -
Tpr7g4020 784 Pfam Leucine rich repeat 128 187 IPR001611 GO:0005515
Tpr7g4020 784 Gene3D Ribonuclease Inhibitor 41 169 IPR032675 -
Tpr7g4020 784 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Tpr7g4020 784 MobiDBLite consensus disorder prediction 425 449 - -
Tpr7g4020 784 MobiDBLite consensus disorder prediction 431 449 - -
Tpr7g4020 784 Gene3D Transferase(Phosphotransferase) domain 1 572 784 - -
Tpr7g4020 784 Gene3D Ribonuclease Inhibitor 170 270 IPR032675 -
Tpr7g4020 784 MobiDBLite consensus disorder prediction 253 319 - -
Tpr7g4020 784 ProSiteProfiles Leucine-rich repeat profile. 128 151 IPR001611 GO:0005515
Tpr7g4020 784 Pfam Protein tyrosine and serine/threonine kinase 497 766 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4020 Tpr-Chr7 49383681 49389615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4020 28 775 Strubbelig Receptor Gene Family AT4G03390 61.599 0.0 859
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Tpr7g4020 PK_Tyr_Ser-Thr 6.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4020 - - mtr:MTR_2g090120 1288.48