Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4015 ATGCCGAAGAACAAAGGAAAGGGAGGAAAGAATCGCAAGAGAGGAAAGAACGAAGCCGATGACGAGAAACGTGAACTCGTATTCAAAGAAGATGGTCAAGAATACGCTCAGGTTCTTCGTATGCTTGGTAACGGTCGATGTGAAGCAATGTGTCTGGACAATAACGGAACCAAACGACTCTGTCATATCCGTGGTAAGTTGCACAAAAAAGTTTGGATTGCTTCCGGCGATATAATTCTCGTCGGTCTCCGTGATTATCAAGATGATAAGGCTGATGTTATTCTCAAATTCATGCCTGATGAAGCTAGGCTTCTTAAGGCTTATGGTGAGCTTCCTGATAATATGAAACTTTATGTCGATTGCGGTGGTGGTGATGATGATGAAGAGGATGATATTGATTGCATTGAGTTTGAGAATGATGATATTGATAAGATTTAA 438 0.411 MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCLDNNGTKRLCHIRGKLHKKVWIASGDIILVGLRDYQDDKADVILKFMPDEARLLKAYGELPDNMKLYVDCGGGDDDEEDDIDCIEFENDDIDKI* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4015 145 Gene3D - 2 145 IPR012340 -
Tpr7g4015 145 MobiDBLite consensus disorder prediction 1 25 - -
Tpr7g4015 145 ProSiteProfiles S1 domain IF1 type profile. 22 98 IPR006196 GO:0003723|GO:0003743|GO:0006413
Tpr7g4015 145 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1A 1 145 - -
Tpr7g4015 145 PANTHER EIF-1A 1 145 IPR001253 GO:0003743|GO:0006413
Tpr7g4015 145 SUPERFAMILY Nucleic acid-binding proteins 2 144 IPR012340 -
Tpr7g4015 145 TIGRFAM eIF-1A: translation initiation factor eIF-1A 14 112 IPR001253 GO:0003743|GO:0006413
Tpr7g4015 145 SMART eIF1neu4 28 112 IPR001253 GO:0003743|GO:0006413
Tpr7g4015 145 Pfam Translation initiation factor 1A / IF-1 32 95 IPR006196 GO:0003723|GO:0003743|GO:0006413
Tpr7g4015 145 Hamap Translation initiation factor 1A [eif1a]. 16 112 IPR001253 GO:0003743|GO:0006413
Tpr7g4015 145 CDD S1_IF1A 33 111 IPR001253 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4015 Tpr-Chr7 49359852 49360289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4015 1 145 Eukaryotic Initiation Factors Gene Family AT2G04520 80.272 2.98e-75 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4015 K03236 - nnu:104600288 221.861