Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4009 ATGGAGGAAAAATTTATTTCTTCCAAACCATGTGCCAAAGAAGATAGCATTGATTTAACCCAAATAACACTCAGACCCTTTCATCTTTCGGACCTTGACGATATCATGGTGTGGTCAACCGATGAAAAAGTGGCCAATTTCTGCTCTTGGGAACCTTACACTAGCAAAGATGATGCAATCAAATTCATTGAAAGTATAGAAACCAAGTTTCTACGTTGCAAAGCAATATGCCATAATGATCGTGCTATTGGGTGCATGCTTATGTTTGCAAGTTCACTTGATGATAAAAGTAGAAACAAATCTGCAGAAATTGGTTATAATCTAGGCTCTAAATATTGGGGTAAGCGCCTTGCAACGTGGGCTGTGAAACAAATTGTTATGGCTGCATTCAGTGAAATGTCACACTTGGAAAGGCTTGAAGCTCTTGTTGATGTGGAAAATGTTGGGTCTCAAAGAGTGTTGGAGAAAGCTGGTTTTCAAAAGGAAGGAGTTCTCAGGAAGTATTTGTTCATGAAAGGAAAAAGCAGAGATATGATTATGTTCAGCATTCTTTCAACTGATCTTCAGCTATGA 573 0.3839 MEEKFISSKPCAKEDSIDLTQITLRPFHLSDLDDIMVWSTDEKVANFCSWEPYTSKDDAIKFIESIETKFLRCKAICHNDRAIGCMLMFASSLDDKSRNKSAEIGYNLGSKYWGKRLATWAVKQIVMAAFSEMSHLERLEALVDVENVGSQRVLEKAGFQKEGVLRKYLFMKGKSRDMIMFSILSTDLQL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4009 190 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 22 184 IPR016181 -
Tpr7g4009 190 Gene3D - 14 190 - -
Tpr7g4009 190 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 13 188 - -
Tpr7g4009 190 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 22 177 IPR000182 GO:0016407
Tpr7g4009 190 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 13 188 - -
Tpr7g4009 190 Pfam Acetyltransferase (GNAT) domain 22 160 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4009 Tpr-Chr7 49318666 49321134 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Tpr7g4009 Acetyltransf_3 2.8e-23 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4009 - - mtr:MTR_5g006520 285.034