Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3989 ATGAAGGTGATAGAGCAGAGTCATGTTGCACCACCACCCAGTTCACTTCCATCACCAACCACACTTCCCCACACTGTCTTCGACAATACATGGTTTTACTGCCGATACCCCGCTAAACGCATATTCTTCTACCACTTTCCTCATCCAACTCATCACTTCCTTCAAACAACACTTCCCATTCTCAAACACTCTCTTTCCTTAACCCTCCAACACTTCTTCCCGTTCTCCTCCAACCTCATCATCCCTTCAGATTCCCAAACTGAACCTTACATACGTTACCTCGATACCGACTCTCTCTGCTTCACCGTAGCTGAATCCTCAGCAGACTTCAACCTCCTCATATCAGATTCACAAGATGCTAAAATCTGGCACTCTCTTGTTCCAAATTTGCCTCCACCTAGTACTGAACAGAACAACACACAAGTCATTCCAATAATGGCCATTCAAATCACTATTATGCCGAACTCCGGCTTATCTATCTGTCTCGCGTTCAAACATGTGGCTGCAGACGGAAAATCACTTCACCATTTTATGAAATTTTGGGCCTCTGTTTCAAAAAACAGAGCAAACAACAAAAACAATTCGTCTCTTGAACACTCTCTGCCACTTGATCTTCCTTCCCATGAAAGACATACAATACTTAATGCCCCAAAAGATCCTAAAATAATCTACTTACAAGAAACACAAGATTATGTATTAGAAAAAGTGGAATTCGCAGATCTCATTCCAGATGTGTATCCTAAAAACGTACGAACTTGTTTAGTGTTGAGTCATGAACAAATTCAGAAACTGAAGAAATGGATTGTTGATAAATGTATAGAAACAACACAATACATTTCAACTTTTGTGGTAACATGTTCCTTGATTTGGTGTTGTATGGTAAAATCAGAGCAAAGTGATCAAGGTGATGTTGTTGATGATCTATGCAACTTCCTGTTTTTTGCAGATTGTCGTGGTCGTCCTGAATTTTCATTATCAAAAACTTACTTTGGAAATTGTCTGGCATCTTATATTGTGGTTGTAAAGAGAGACGAGTTAGTTGGAAATAATGGCATTGTTGTGGCGGCAAATGGTATTGATAGGAAGATAAGAGATTTCAAGAGTGATGAAGCGTTAGGATCTGAAACGTTGATGCTTGATTATAGGGAATTATTTATACCAGGTAAGTCGATTTTAGTAGTTGCTGGATCACCTAAACATGCTGTTTATGAGACTGATTTTGGGTGGGGAAAGCCTAAGAAATCTGATAAGGTTCATCATGTTTCGTGTACGATTTCGCTTTCTGATTGTAGAGTTGGTGGAAGCGGAATTGAGATTGGTTTGGCTCTTGAGAGGTCTCGAATGGCTAATTTCATGAACATCTTTCAAGAACAACTTGATAATATTTGTAGCATGTGA 1398 0.3941 MKVIEQSHVAPPPSSLPSPTTLPHTVFDNTWFYCRYPAKRIFFYHFPHPTHHFLQTTLPILKHSLSLTLQHFFPFSSNLIIPSDSQTEPYIRYLDTDSLCFTVAESSADFNLLISDSQDAKIWHSLVPNLPPPSTEQNNTQVIPIMAIQITIMPNSGLSICLAFKHVAADGKSLHHFMKFWASVSKNRANNKNNSSLEHSLPLDLPSHERHTILNAPKDPKIIYLQETQDYVLEKVEFADLIPDVYPKNVRTCLVLSHEQIQKLKKWIVDKCIETTQYISTFVVTCSLIWCCMVKSEQSDQGDVVDDLCNFLFFADCRGRPEFSLSKTYFGNCLASYIVVVKRDELVGNNGIVVAANGIDRKIRDFKSDEALGSETLMLDYRELFIPGKSILVVAGSPKHAVYETDFGWGKPKKSDKVHHVSCTISLSDCRVGGSGIEIGLALERSRMANFMNIFQEQLDNICSM* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3989 465 PANTHER - 1 464 - -
Tpr7g3989 465 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 1 464 - -
Tpr7g3989 465 Coils Coil 459 465 - -
Tpr7g3989 465 Pfam Transferase family 12 454 - -
Tpr7g3989 465 Gene3D - 247 462 IPR023213 -
Tpr7g3989 465 Gene3D - 1 240 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3989 Tpr-Chr7 49165486 49168268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3989 35 412 Monolignol Biosynthesis Gene Families AT5G48930 22.646 5.38e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3989 - - mtr:MTR_2g089670 634.795