Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3988 ATGGCAGAGCTTATAGGAACAAAACATAAGCTTATTGAACAAACTATGATTTTTCCATCATCAACAACAAAAATTTGTCTTCCTCTTACATTTCTTGACTTACCTTTAGCAGGTCCAATCTATGTTCGACGCCAATTCTTCTATCGATTTCCTCAGTCGACAAACCATTTTTGCCAAACAACTTTTCCATCTCTCAAACAATCACTATCTCTCACTCTTCAACATTTCTTCCCTCTTGCTGGAAATCTCATCTCTCCGCCGCCACCAAATAAACCCTTCATTCTCTGCACTGAAAAAGACTCTGTCCCTTTTACCATCGTCGAATCTTCCGAAGATTTCAACCATCTTTCAGCCAATTACAAACTCAAAAATATGAAAGACTTTAACCACCTTGTTCCAAAATTAACACATAAAACAATCCACGATGACAATGACAATGACAACGAAGATAACAACACCTTTGTCTTTCCTTTGTTGTCTTTGCAAGCTTCTGTTTTTCCTAACAATGGTCTTTGCATTGCAATCACATATTGTCATGTTATGGATGATAATTGTTGTAGTCATTTCATGAAGACTTGGTCTTTAATCCATGGAAAATTTGAAGGTGTTGACTTAAAGTCAACGCCTTGTTTTGATAGAGATATTTTGAGGGACCCAAAAGGGTTACTTGAGAATGTTTTCTTAAGAGACTATTTTGAAGAAAGAAAAACATGGAAGAATAAACTCATTGGTCAAACTCAAACTCAAACTATTAAAGAACATCATGAAGTGGTTGAAGATTATTTTAAAGCAACTATTGTTTTTGGAAAAGAAGAAATTGAGAGAATGAAAAAATGGGTACTTAGTCAATGGAATAAAAATGATCATGAAATTATAAAGCCACAATTTTTATCTAAATTTGTTGTAACTTGTGGTTTTGTTTGGGCTAATTTGGTTAAAACAAGATATAGAAATGATAATAATGATGAAAAAGAAGAGTTTTTTCGTTTTGCAGGTGATTGTAGAGATAGACTTGGGTACAAAATACCAGAAGGGTATTTTGGGAATTGTTTAACACTATGTCATGCAACAGTGAAGAGAAAAGATATGAAAGGTGAAGATGGTTTTGTGAAAGCTGTTAAGGTAATTGAAAGGGCAATAAGTGAAATGAAAAATGAACCTTTTAAAAATGTTGAAGAATGGAGAGATACATTTAAGAATATGTTTGAATTTGGAAGTGTTTTGTTGGTGACAGGTTCACCTAAGTTTAATGTTTATGAGACTGATTTTGGATTTGGAAAACCTGTTAAAGTTGAAATGATGCATTCTTTTAAGTGTATGTCTATTGCTGAAAGTGGAGATAGAGATGGTGGAATTGAGGTTGGGTTGGTATTCAAAAGTGGAGAATTTGAATATTTCTGTTCTGTTATTGAACAAGGACTTGAAGCTTTTAAATCCTAA 1440 0.3333 MAELIGTKHKLIEQTMIFPSSTTKICLPLTFLDLPLAGPIYVRRQFFYRFPQSTNHFCQTTFPSLKQSLSLTLQHFFPLAGNLISPPPPNKPFILCTEKDSVPFTIVESSEDFNHLSANYKLKNMKDFNHLVPKLTHKTIHDDNDNDNEDNNTFVFPLLSLQASVFPNNGLCIAITYCHVMDDNCCSHFMKTWSLIHGKFEGVDLKSTPCFDRDILRDPKGLLENVFLRDYFEERKTWKNKLIGQTQTQTIKEHHEVVEDYFKATIVFGKEEIERMKKWVLSQWNKNDHEIIKPQFLSKFVVTCGFVWANLVKTRYRNDNNDEKEEFFRFAGDCRDRLGYKIPEGYFGNCLTLCHATVKRKDMKGEDGFVKAVKVIERAISEMKNEPFKNVEEWRDTFKNMFEFGSVLLVTGSPKFNVYETDFGFGKPVKVEMMHSFKCMSIAESGDRDGGIEVGLVFKSGEFEYFCSVIEQGLEAFKS* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3988 479 Gene3D - 258 477 IPR023213 -
Tpr7g3988 479 Pfam Transferase family 11 467 - -
Tpr7g3988 479 Gene3D - 9 242 IPR023213 -
Tpr7g3988 479 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 479 - -
Tpr7g3988 479 PANTHER - 7 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3988 Tpr-Chr7 49155574 49157298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3988 8 466 Monolignol Biosynthesis Gene Families AT5G48930 23.285 1.30e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3988 - - gmx:100813271 622.854