Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3982 ATGGAGTTTAACCTTGAAAACCCTCTTGAAAACTTCCATGACCTTCCTAATTCTCAATGTGTTTCTTCTCTTTTTCTTATTGAATCTGACCACATCCCACCACTAAATTACTTTCATAGTCTCAAATCAAACGAGTTTGATGCCTCAGTTAGAAGTGATTTCATCTCTTTGATCTCACAGTTGTCCTGCAACTTTGATCCATTTGTGACTTACCTAGCTATCAACTATTTGGATCGCTTCCTTGCTAATCAAGGGATATTGCCAAAGCCATGGGCCAATAAACTTATTGCAGTAACTTGCTTCTCTCTAGCAATAAAGATGTTGAAAACAGAGTACTCTGCCACTGATGTTCAGGCTCTTCTGAATCATAGTGATGGTGGTTTCATATTTGAGACACAAACAATACAAAGAATGGAAGCACTTGTCTTAGGAGCATTACATTGGAGAATGCGTTCAATCACTCCTTTCTCTTTCATTCCTTACTTCATCAATTTGTTTAGGCTTGATGATATAACATTAAAAGTTCTTAAAGATAGAGCTTCTGAAATTATATTGAAGTCACAAAAAGATATTAAGGTTTTGGAATTCAAGCCATCTATAGTTGCTGCTTCATCTCTTCTTTATGCTTCTCATGAATTGTTTCCATTTCAATATCCAGGCTTCTTGGGAACAATATCCGATTGTTCATATGTAAATAAAGAAAGTGTTGTGGAGTGCTATAATGTTATACAAGATATAGCTAAGGAGGAGTACGAATCCATGTTTAATGTGAATTCAAGTTCAGGCACACCAGTTAATGTGTTGGACGAAAATTTTCTAAGCTTGGAAAGTGAAAAAACCAATGGAACCAATGTTACTCCTACTAAGAGAAGGAAAATTTAA 882 0.3549 MEFNLENPLENFHDLPNSQCVSSLFLIESDHIPPLNYFHSLKSNEFDASVRSDFISLISQLSCNFDPFVTYLAINYLDRFLANQGILPKPWANKLIAVTCFSLAIKMLKTEYSATDVQALLNHSDGGFIFETQTIQRMEALVLGALHWRMRSITPFSFIPYFINLFRLDDITLKVLKDRASEIILKSQKDIKVLEFKPSIVAASSLLYASHELFPFQYPGFLGTISDCSYVNKESVVECYNVIQDIAKEEYESMFNVNSSSGTPVNVLDENFLSLESEKTNGTNVTPTKRRKI* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3982 293 Gene3D - 34 151 - -
Tpr7g3982 293 SUPERFAMILY Cyclin-like 135 248 IPR036915 -
Tpr7g3982 293 SMART Cyclin_C_2 153 267 IPR004367 -
Tpr7g3982 293 Pfam Cyclin, C-terminal domain 153 250 IPR004367 -
Tpr7g3982 293 SUPERFAMILY Cyclin-like 19 150 IPR036915 -
Tpr7g3982 293 PANTHER CYCLINS 5 279 IPR039361 -
Tpr7g3982 293 SMART cyclin_7 157 245 IPR013763 -
Tpr7g3982 293 SMART cyclin_7 53 144 IPR013763 -
Tpr7g3982 293 Gene3D - 23 241 - -
Tpr7g3982 293 CDD CYCLIN 53 143 IPR013763 -
Tpr7g3982 293 Pfam Cyclin, N-terminal domain 28 150 IPR006671 -
Tpr7g3982 293 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 5 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3982 Tpr-Chr7 49105017 49108035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3982 1 292 Core Cell Cycle Gene Families AT4G03270 47.231 2.20e-79 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3982 K18812 - gmx:100799951 457.988