Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3981 ATGATGAGAACTTCTTTTTGTGAAAAAAATGGATTGAGAAAAGGCACTTGGACAACTGAGGAAGACAAAAAGTTGATTGCTTATGTTACTAGGTATGGTTGCTGGAATTGGCGCCAACTACCTAAATTTGCAGGTCTTGAAAGGTGTGGGAAGAGTTGTAGATTAAGGTGGTTGAACTATCTAAAGCCAGGTATCAAAAGAGGGAACTTTAGTCAACAAGAAGAAGAAACTATCATTAAACTTCACCAAAAATTGGGTAATAGATGGATCGTGATTGCTGCAAATTTACCAGGGAGAACAGATAACGAGATAAAGAATTACTGGCACACTATCTTGAAAAAACGTGTTATGAAAAATAGTATGTCAGACGCTAAATGTGGAACAAGAAAAGCCAAAGTTTCAGAGTCAAATGATCACCCTACAATGGAAGCTGAAGCCAGTAAAATTGATTGTGTATTAGAGAACAATAGTAGTGCCAATATCTCAAATCCACTTTCTTCAAAATCATCTTCAAGTGAATTTTCTTGCATAACAATGGATAGTGCAGCTACCAAAATATCATATGAAAATTCTCTTTTTGATGACAATGACATTCCTTTTATGAATGAATACATGGAAGCTGTGAGTGAAAATTTCTGGACAGAGCCATATATGATAGAGAGTACTTATGTCCATCCAAGTGAAGAAGCTATATTACTTCCTGCAGGGTGTGAACATGAATACTTTAGTCCTAAGTACGATATAGAACTTTGGAGCAGTGTAGAATAA 768 0.3568 MMRTSFCEKNGLRKGTWTTEEDKKLIAYVTRYGCWNWRQLPKFAGLERCGKSCRLRWLNYLKPGIKRGNFSQQEEETIIKLHQKLGNRWIVIAANLPGRTDNEIKNYWHTILKKRVMKNSMSDAKCGTRKAKVSESNDHPTMEAEASKIDCVLENNSSANISNPLSSKSSSSEFSCITMDSAATKISYENSLFDDNDIPFMNEYMEAVSENFWTEPYMIESTYVHPSEEAILLPAGCEHEYFSPKYDIELWSSVE* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3981 255 CDD SANT 69 112 IPR001005 -
Tpr7g3981 255 Gene3D - 14 66 - -
Tpr7g3981 255 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Tpr7g3981 255 CDD SANT 16 61 IPR001005 -
Tpr7g3981 255 SMART sant 66 114 IPR001005 -
Tpr7g3981 255 SMART sant 13 63 IPR001005 -
Tpr7g3981 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Tpr7g3981 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Tpr7g3981 255 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 223 - -
Tpr7g3981 255 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Tpr7g3981 255 Gene3D - 69 141 - -
Tpr7g3981 255 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Tpr7g3981 255 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 223 - -
Tpr7g3981 255 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Tpr7g3981 255 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3981 Tpr-Chr7 49094755 49097060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3981 1 119 MYB Transcription Factor Family AT2G31180 68.908 9.12e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr7g3981 Myb_DNA-binding 6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3981 K09422 - mtr:MTR_2g089420 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3981 7 49094755 49097060 Tpr7g3981 7 49094755 49097060 ECH
Tpr7g3981 7 49094755 49097060 Tpr4g1362 4 13154395 13156180 PCT
Tpr4g1364 4 13191452 13193395 Tpr7g3981 7 49094755 49097060 PCT