Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3977 ATGAAGAAGAATTGTGAACTTTGCAAACTTCCGGCTAGAACTTTCTGTGAGTCAGACCAAGCTAGCTTATGCTGGGACTGCGATTCTAAGGTCCACGGTGCTAATTTCTTAGTTGAGAGACACACAAGAACTCTCCTCTGTCGCGCTTGTCAATCTCCGACGCCTTGGAAAGCTTCCGGTGCTAGACTCGGTAACGCGCTTTCGTTGTGTGAAAGATGCGCCGGTGGAAGAAAAGTTGATTCCGTTCAACAAGATGAAGAGAGTGAAGGTGACAATGAGGATGATGTTGAAACTGATTCCGATGAGGAGGATTCTGATGAGGATGAGGATGATGTTGACGGTGATAATCAGGTTGTTCCTTGGTCTTCAACTGCGATGCCTCCACCGGCGTCGAGTTCTTCCGGTAGTGAAGAGTCGGTTTGCAAGTGTAACGAGAACGATGAAGTTGTTTCGCAGTTAGTTACAGCAATTACCTTGAAACGACGTCGTGTGGATCATGATTTTCAGGATTCGGATTCTAAAAACTGGAAAAATCAACGGAGAGAGGAGGATGATTTGTTAGGGTATGTCGGAGAACCGTCGTCAAAGGCGGCGATACGGCGTTATTGTGACGGAGATGAAACGGAGCATTCTCAGCCACACGATTGA 648 0.4691 MKKNCELCKLPARTFCESDQASLCWDCDSKVHGANFLVERHTRTLLCRACQSPTPWKASGARLGNALSLCERCAGGRKVDSVQQDEESEGDNEDDVETDSDEEDSDEDEDDVDGDNQVVPWSSTAMPPPASSSSGSEESVCKCNENDEVVSQLVTAITLKRRRVDHDFQDSDSKNWKNQRREEDDLLGYVGEPSSKAAIRRYCDGDETEHSQPHD* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3977 215 MobiDBLite consensus disorder prediction 162 189 - -
Tpr7g3977 215 PANTHER - 3 187 - -
Tpr7g3977 215 MobiDBLite consensus disorder prediction 80 113 - -
Tpr7g3977 215 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
Tpr7g3977 215 MobiDBLite consensus disorder prediction 86 113 - -
Tpr7g3977 215 SMART bboxneu5 1 46 IPR000315 GO:0008270
Tpr7g3977 215 MobiDBLite consensus disorder prediction 162 192 - -
Tpr7g3977 215 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 187 - -
Tpr7g3977 215 CDD Bbox1_BBX-like 5 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3977 Tpr-Chr7 49051419 49052691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3977 1 130 C2C2-CO-like Transcription Factor Family AT4G27310 44.706 5.54e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr7g3977 zf-B_box 9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3977 - - mtr:MTR_2g089310 283.108