Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3967 ATGCACGTCCACATGAAAGCTGAGTTAAAAGCAGCATCAATTTCCTTCCAAAACCAAACACTCTTCAACACACACCAAACCACTCCTCCTCTACCTGAACCAGAAGCACTTAAAGGTTGTCTAGGAAGCTTAGATGGAGCATGTATTGAAAAGCTTTTACTTCATTGTGCAAGTGCTTTAGAAAGCAATGACATAACCTTAGCTCAACAAGTTATGTGGGTCTTAAACAACGTTGCTTCACCCTTAGGTGACACAAATCAAAGACTTACTTCATGGTTCCTTAGAGCATTAATCTCTAGAGCTTCAAGAATTTGTCCTGTTTCAATGAATTTCAAAGGAAGTAACATAATTCAAAGAAGATTGATGTCGGTTACCGAACTCGCCGGGTATGTTGATTTAATTCCTTGGCATAGGTTTGGATTTTGTGCTTCAAATAATGAAATTTTCAAAGCAATTAAAGGATTTAAAAGGGTACATATTTTAGATTTTAGCATAACACCTTGTATGCAATGGCCTACTTTTATAGATTCTTTGGCTAAATTACAAGAAGGTCCTCCTTCACTTAGAATCACAGTTCCATTTTTTAGGCCAATGGTTCCTCCTTTGGTCAATATCTCAATACATGAAGTTGGTCAACGTTTAGGTAATTTTGCAAAGTTTAAGGATGTCCCTTTTGAATTTAATGTTATTGGAGATAATGTTTCATTGACTTCTGAAGAATTGAGCAATATTGAATCAACAAATTTTCATTTTGAATCAATGTTGAATCTCTTGAATCCTAACATGTTAAGTCTTAGGGAAGATGAAGCTTTGGTTATAAATTGTCAAAATTGGCTACGATATTTGTCCGATGATCGAAAAAGTCAAAATATTTCGATTCGAGACGCTTTTATAAATTTAGTTAAAGGACTTAACCCTCAAATTGTGCTATTGGTTGATGAGGATTGTGATCTTAGTTCATCAAGTTTAACATCAAGAATTACAGCTTCTTTTAACCATTTATGGATACCCTTTGATGCATTAGACACTTTTTTACCTAAAGATAGTTGTCAAAGGACAGAGTTTGAATCTGACATAGGACAAAAAATTGAGAACATTATAAGCTATGAAGGGAATCAAAGAATTGAGAGATTGGAATCAGGGTTGCAAATGTCACAGAGAATGAAAAATGCTGGTTACTTTAGTGTTCCATTTTGTGATGAAACTATTTTGGAAGTTAAGGGTTTGCTTGATGAACATGCTAGTGGATGGGGAATGAAAAAGGATGAAAGCATCTTGGTTCTTACATGGAAAGGAAATAGTTGTGTGTACGCGACCGCTTGGGTCCCTAACGAAATTAGGGATCATATCGGTTTGAATGCACATGTGTAG 1371 0.3538 MHVHMKAELKAASISFQNQTLFNTHQTTPPLPEPEALKGCLGSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPVSMNFKGSNIIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHILDFSITPCMQWPTFIDSLAKLQEGPPSLRITVPFFRPMVPPLVNISIHEVGQRLGNFAKFKDVPFEFNVIGDNVSLTSEELSNIESTNFHFESMLNLLNPNMLSLREDEALVINCQNWLRYLSDDRKSQNISIRDAFINLVKGLNPQIVLLVDEDCDLSSSSLTSRITASFNHLWIPFDALDTFLPKDSCQRTEFESDIGQKIENIISYEGNQRIERLESGLQMSQRMKNAGYFSVPFCDETILEVKGLLDEHASGWGMKKDESILVLTWKGNSCVYATAWVPNEIRDHIGLNAHV* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3967 456 Pfam GRAS domain family 50 441 IPR005202 -
Tpr7g3967 456 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 443 IPR005202 -
Tpr7g3967 456 PANTHER OS05G0500600 PROTEIN 6 443 - -
Tpr7g3967 456 ProSiteProfiles GRAS family profile. 40 442 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3967 Tpr-Chr7 48944702 48946920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3967 31 443 GRAS Transcription Factor Family AT3G49950 43.943 9.30e-116 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr7g3967 GRAS 1.3e-83 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3967 - - gmx:100805056 720.309