Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3964 ATGAATTTATTAAAAGGAACAAGACAAATGACAAAACCTAGTTATTTGGTTGTTTATGTCATTCTTCTTTGCGCTTTAGCCAAAGGAGGTTCAGAGGGTAAGAGGTGGAAAAATGAGGACTTTTATAGATATTATCTTGGAATAAAGGCAGAGCAGATGTGGAAACATTGCAGGAATGAAATGATAGAGAGGAATTATGATATCGAATTTGACTTGCATTTATTGGATGAGATGGGCGAAAAGAGATCTAAATTTCTACCTCCCAATGTGAAACAACACTTTCTAGATTGCATCTTAAACAGAAATTTTCCTATTCCTGCTTCGGAACAAGAGGGATATTCGTTGAAGAAGCATTATGAGTCACTTTTTGGTTTATCAGATGGACATAGATATTTTCTCTCAGAGTTACAACATAATCAGACACCACCAAGTCCTGATTCTGTTCCATCATCTGGATCATCACCGAAGCCAAAAGGTCAAGTTGCAGCACAAGTCAATTTGACACCTCCAGCTCCTGGACTTCCATACGATGATTTTCTGCTCACTCCACCATTTGCACCACCACCTCCTTCTCGTGCTACTCTTGATGACGAGAAACAACGGAAATCAATTATTATTGCTGGAGTTGCATCAGGAATTATAATCTTAATAGGCTTGTTCTTATGCTATCGCGAGGTGAAGAAGAGAAAAATATTTGCGAGAGATGACAGGCCTTTACTCATATTAAGTGACTTCTCTGGTGGTAGTTCACAAAAGTCTACTGCTTTTGAAAATTCTGATATGAGAGAACATGGTATTAACTATGGAACAAATCCTTCTACTGTTAGGAATTTGCCCATTAAGCATGAAGTCAACAATGGTTCACTGAATGAGATAACATTATCAGATGACAAGGGACAAGTACCGGTGTCACAATTACAACATCCTCCAGGAAGATCAGCCCCTGAGGCTCCACCAACACCGCCGCCTCCACCACCTGCTCTTGCACCTCAGCCTTGGACTCGGACTCCACCTCCTCCAAAAATGTCTCAGGCTCCACCTGCTCCTCCCAAACCAATGGCAGGTAGAAACCAAAAATCACCTCTAGGACCACATCGTCGTACTAGTGATGACTCCGATGCTCCAAAACCTAAATTAAAGCCATTTTTCTGGGATAAGGTTTCAACAAATCCTGATCAAGCTATGGTCTGGCATGAGATCAGAGCCGGGTCATTCCAGTTCAGTGAAGAGAAGATAGAGTCTTTATTTGGCTGCCCCAACCAGAACAGAAATGAAAGAAGAAAAGATGCTCCTTCTTTAGAACCTTCGGTCCAGTACATTAAGATTCTTGAGCCCAAGAAAGCACAGAATTTATCAATTCTTTTACGTGCTCTGAATGTGAGCACAACAGAAGTTACCGACGCCCTAAATGAAGGTAATGAGATTCCTGTTGAGCTCATCCAAACAGTATTGAAGATGTGGCCAACAATGGATGAGGAATCAAAGCTAAAGTTATACACAGGCGACGTTTCTCAACTTGGCCCTGCAGAGAGGTTTCTCAAGGCCTTGGTTGATATTCCACTAGCTTTCAAACGTTTTGAGTCTCTACTGTTCATGTTTACACTTCCAGAAGAGGCTTCAAACATTAAGGAATGCTTTACAACATTAGAGATTTCTTGCAACGAACTAAGAAAAAGCAGGCTCTTCCAAAAGCTATTAGAAGCAGTTCTAAAGACAGGAAACCGATTGAACGATGGCACCTATCGTGGTGGGGCTCAAGCATTTAAGCTTGACACACTTTTGAAACTTGCAGATGTAAAAGGAACAGACGGCAAGACCACACTGTTACACTTTGTGGTTCAAGAGATCATACGTTCCGAGGGCATAAGAGCTGTAAGAACAGAAAAAGAAAGCCCAAGCCATTCTAGTATGAAAACCGAGGATTCCATTGATGATTCAAATAGGCAATCAGAAGAGCACTACCGCAGCCTTGGCCTTCAAGTAGTTTCAGGTCTAAGCACCGAACTAGAAGATGTGAAAAAGGCAGCACTAATAGATGGAGATGCTCTAACAGCTGCAGTATTGAAACTTGATCATAGATTGGCAAAAACTGAAGATCTGTTGAATAATGATCTGAAGAATCTTGAAGAAGAGAGTGAGTTTCAATATTCCCTTGCAGATTTTGTGGAGAAATCAAAAGAGGAAGTGAAATGGTTAACAGGGGAAGAGAAGAGGATAATGGCCGAGGTTAAGAATACTGCAGATTATTTTCATGGAAACGCAGGAAAAGATGAAGGGCTGCGTTTGTTTGTGATTGTACGCGATTTCTTGTTGATGTTGGACAAGGTGTGCAAAGAGGTTAAAGTATCAACCAAGACAGTAGCGATTAAGGATCTTTCTTCATGCAAGAAAGAGGCTTCTTCAATGTCATCCTCTCCGGATACTCAGCAACCATCACCTTCTGATATGCATAGGAGGCTCTTTCCAGCCATAGCAGAGAGGAGAATGCAAGACTCTAGTTCCGACGACGATGATGATGATAATGAGAGATTACCAACGTAG 2541 0.4136 MNLLKGTRQMTKPSYLVVYVILLCALAKGGSEGKRWKNEDFYRYYLGIKAEQMWKHCRNEMIERNYDIEFDLHLLDEMGEKRSKFLPPNVKQHFLDCILNRNFPIPASEQEGYSLKKHYESLFGLSDGHRYFLSELQHNQTPPSPDSVPSSGSSPKPKGQVAAQVNLTPPAPGLPYDDFLLTPPFAPPPPSRATLDDEKQRKSIIIAGVASGIIILIGLFLCYREVKKRKIFARDDRPLLILSDFSGGSSQKSTAFENSDMREHGINYGTNPSTVRNLPIKHEVNNGSLNEITLSDDKGQVPVSQLQHPPGRSAPEAPPTPPPPPPALAPQPWTRTPPPPKMSQAPPAPPKPMAGRNQKSPLGPHRRTSDDSDAPKPKLKPFFWDKVSTNPDQAMVWHEIRAGSFQFSEEKIESLFGCPNQNRNERRKDAPSLEPSVQYIKILEPKKAQNLSILLRALNVSTTEVTDALNEGNEIPVELIQTVLKMWPTMDEESKLKLYTGDVSQLGPAERFLKALVDIPLAFKRFESLLFMFTLPEEASNIKECFTTLEISCNELRKSRLFQKLLEAVLKTGNRLNDGTYRGGAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRSEGIRAVRTEKESPSHSSMKTEDSIDDSNRQSEEHYRSLGLQVVSGLSTELEDVKKAALIDGDALTAAVLKLDHRLAKTEDLLNNDLKNLEEESEFQYSLADFVEKSKEEVKWLTGEEKRIMAEVKNTADYFHGNAGKDEGLRLFVIVRDFLLMLDKVCKEVKVSTKTVAIKDLSSCKKEASSMSSSPDTQQPSPSDMHRRLFPAIAERRMQDSSSDDDDDDNERLPT* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3964 846 ProSiteProfiles Formin homology-2 (FH2) domain profile. 369 799 IPR015425 -
Tpr7g3964 846 MobiDBLite consensus disorder prediction 363 380 - -
Tpr7g3964 846 Gene3D Formin, FH2 domain 375 809 IPR042201 -
Tpr7g3964 846 MobiDBLite consensus disorder prediction 624 650 - -
Tpr7g3964 846 MobiDBLite consensus disorder prediction 312 354 - -
Tpr7g3964 846 MobiDBLite consensus disorder prediction 820 834 - -
Tpr7g3964 846 MobiDBLite consensus disorder prediction 138 161 - -
Tpr7g3964 846 MobiDBLite consensus disorder prediction 796 815 - -
Tpr7g3964 846 Pfam Formin Homology 2 Domain 371 773 IPR015425 -
Tpr7g3964 846 PANTHER FORMIN-RELATED 9 839 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tpr7g3964 846 MobiDBLite consensus disorder prediction 292 385 - -
Tpr7g3964 846 MobiDBLite consensus disorder prediction 796 846 - -
Tpr7g3964 846 SUPERFAMILY Formin homology 2 domain (FH2 domain) 321 782 - -
Tpr7g3964 846 SMART it6_source 369 791 IPR015425 -
Tpr7g3964 846 PANTHER FORMIN-LIKE PROTEIN 9 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3964 Tpr-Chr7 48904932 48910561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3964 186 829 FH2 protein (formin) Gene Family AT5G54650 48.459 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3964 - - lja:Lj3g3v2888350.1 813.913