Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3959 ATGGCTTCCTCAAGACACTTTCCAATTATTCTCTTCTCATTTACCTTAGTTTTTCTCATCCAAACATCTTTTGGAGCCGATCCACTTTTCCATTTTTGTTCAAACTCGGGTAACTTCACGGCCAATAGCACATATGAATCAAAGTTAAAAACACTCGTAAATTCACTTATTTACAAAACACCATTAACAGGTTTTGGCACTGGATCAGTGGGACTGGTCCAGTACCAAAACGAACAAGCATATGGGCTAGCTCTTTGTCGTGGTGATGTCTCAACTTCAGAGTGTAAAACTTGTGTCTCCGAAGCATCCCAAGAAATCCAAAGTCGATGCCCATACAACAAAGGCGCAATCATATGGTACGACTATTGCTTATTTAAATACTCGGATTCGGATTTCATTGGTAAGATTGACAACTCCAACAAATTCTATATGTGGAATTTGAATGTTGTTAATGACACTACCACTTTTAATTACAAGACTAAAGATTTATTGAGCCAACTTGCACACAAAGCTACTATGAATCCTAAATTGTATGCAACGGGAGAGGCAGAACTTGAGAATTCAAAGAAACTTTATGGTTTAACTCAATGCACTAGAGACCTTTCTAGTGATGATTGCAAGAATTGTCTTGATGTTGCAATTAATGAACTTCCAAATTGTTGTGATGGAAAAGAAGGAGGTAGAGTTGTTGGAGGAAGCTGCAACTTTAGATATGAGATATACCCGTTTGTCAAAGAGTAA 741 0.3752 MASSRHFPIILFSFTLVFLIQTSFGADPLFHFCSNSGNFTANSTYESKLKTLVNSLIYKTPLTGFGTGSVGLVQYQNEQAYGLALCRGDVSTSECKTCVSEASQEIQSRCPYNKGAIIWYDYCLFKYSDSDFIGKIDNSNKFYMWNLNVVNDTTTFNYKTKDLLSQLAHKATMNPKLYATGEAELENSKKLYGLTQCTRDLSSDDCKNCLDVAINELPNCCDGKEGGRVVGGSCNFRYEIYPFVKE* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3959 246 ProSiteProfiles Gnk2-homologous domain profile. 27 132 IPR002902 -
Tpr7g3959 246 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 15 245 - -
Tpr7g3959 246 Gene3D - 26 132 IPR038408 -
Tpr7g3959 246 Gene3D - 138 243 IPR038408 -
Tpr7g3959 246 Pfam Salt stress response/antifungal 33 129 IPR002902 -
Tpr7g3959 246 Pfam Salt stress response/antifungal 151 240 IPR002902 -
Tpr7g3959 246 ProSiteProfiles Gnk2-homologous domain profile. 138 243 IPR002902 -
Tpr7g3959 246 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38 15 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3959 Tpr-Chr7 48877778 48878634 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3959 29 245 Pollen Coat Proteome AT4G20670 41.304 4.09e-51 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3959 - - gmx:100527155 412.92