Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3957 ATGTCTTCCTCTAATCTCTTCACAACTATTCTCATCTCATTAACCTTGGCTCTAATTACTCAAACATCTTTTGCACTCAATGACCCTCTTTCCCACATTTGTTCGAACTCCGAGAATTTCACAGCCTATAGCCCATATGAATCAAACTTGAAAACACTCATCAACTCGCTTATATACAAAACCCCTTCAACCGGTTTTGGTATTGGATCAGTGGGCCTGGTCCAAAACCAACAAGCATATGGGCTCGCTCTTTGTCGTGGCGATGTATCAACCTCAGAGTGTAAAACCTGTGTCTCAGACGCAACCAAAGAAATTCAAAGTCGTTGTCCATACAATAAAGGCGCGATCATATGGTACGATAATTGCATGTTCAAGTACTTGGACAACGATTTCATTGGCAAAATTGATAATACAAACAAGTTCACTTTATTGAATGTACAAAGTGTTAATGATCCTATCAAATTCAACAACATAACTAAGGACTTATTGAGCTTACTTGCTAATGAAGCTTCTATGGATAAGAAATTTTATGCTAGTGGAGACTTGAAGATTGGAGAATCAGAGAGAGTTTATGGGCTAACTCAATGCACTAGAGACCTTTCTAGTGTTGATTGTAAGAAGTGTCTTGATGATGCAATTAGTGAACTAATACCATATGGGAAAAAAGGAGGCAGAATTCTTAGTGGAAGTTGTAACATTCAATATGAAGTTTACAAATTTGTTAAGGAGTAA 732 0.373 MSSSNLFTTILISLTLALITQTSFALNDPLSHICSNSENFTAYSPYESNLKTLINSLIYKTPSTGFGIGSVGLVQNQQAYGLALCRGDVSTSECKTCVSDATKEIQSRCPYNKGAIIWYDNCMFKYLDNDFIGKIDNTNKFTLLNVQSVNDPIKFNNITKDLLSLLANEASMDKKFYASGDLKIGESERVYGLTQCTRDLSSVDCKKCLDDAISELIPYGKKGGRILSGSCNIQYEVYKFVKE* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3957 243 PANTHER DOMAIN-CONTAINING PROTEIN 2, PUTATIVE-RELATED 1 242 - -
Tpr7g3957 243 Pfam Salt stress response/antifungal 34 126 IPR002902 -
Tpr7g3957 243 Pfam Salt stress response/antifungal 151 237 IPR002902 -
Tpr7g3957 243 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 1 242 - -
Tpr7g3957 243 Gene3D - 27 131 IPR038408 -
Tpr7g3957 243 Gene3D - 137 240 IPR038408 -
Tpr7g3957 243 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Tpr7g3957 243 ProSiteProfiles Gnk2-homologous domain profile. 137 240 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3957 Tpr-Chr7 48872796 48873607 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3957 1 242 Pollen Coat Proteome AT4G20670 35.039 2.36e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3957 - - gmx:100527155 345.125