Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3956 ATGCATTCCTCAAACCTTATTATTCTCTTCACATTTACTTTTGCATTCCTTATGCAAACATCTTTTGGAACGGACCCACTTTTTCATTTTTGTTCAAACTCCGGTAATTTCACTGCCCAAAGTCCATATAAATCAAGCTTGAAAACACTCATCAACTCACTTATCTATGAGACACCTTCAACGGGTTTCGACAATGAGTCAGTGGGCCTGGCCCAATACCAAAACCAACAAGTATATGGACTAGCTCTTTGTCGTGGCGATGTATCAACCTTAGAATGCAAAACTTGTGTCTCAGAGGCAACTAAAGAAATCCAACGTCGCTGCCCATACAATAAAGGCGCGACCATATGGTACGACAATTGCATGGTCAAATACTTAAACATTGATTTCTTTGGTAAGATTGATAATACAAGCAAGTTCTCTTTATTAAATGTACAAAATGTTGATGATCCTATCAAATTCAACAACATGACTAAGAGCTTATTGAGCATACTTGCTTATGAAGCTTCTATGCATCATAAATTATATGCTAATGGAGAATTGAAGATTGGAGAATCAGAGAAAATTTATGGGTTAACTCAATGCACTAGAGACCTTTCTAGTGTGGATTGTAAGAAATGTCTTGATGATGCAATTAGTGAACTTCCAAATTGTTGTGATGGAAAAAAAGGAGGCAGAGTTGTTGGTGGAAGTTGTAACATTCGATATGAAGTTTACCCGTTTGTTAAGGTGTAA 735 0.3673 MHSSNLIILFTFTFAFLMQTSFGTDPLFHFCSNSGNFTAQSPYKSSLKTLINSLIYETPSTGFDNESVGLAQYQNQQVYGLALCRGDVSTLECKTCVSEATKEIQRRCPYNKGATIWYDNCMVKYLNIDFFGKIDNTSKFSLLNVQNVDDPIKFNNMTKSLLSILAYEASMHHKLYANGELKIGESEKIYGLTQCTRDLSSVDCKKCLDDAISELPNCCDGKKGGRVVGGSCNIRYEVYPFVKV* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3956 244 Pfam Salt stress response/antifungal 148 238 IPR002902 -
Tpr7g3956 244 Pfam Salt stress response/antifungal 31 125 IPR002902 -
Tpr7g3956 244 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38 10 243 - -
Tpr7g3956 244 Gene3D - 135 241 IPR038408 -
Tpr7g3956 244 Gene3D - 24 130 IPR038408 -
Tpr7g3956 244 ProSiteProfiles Gnk2-homologous domain profile. 136 241 IPR002902 -
Tpr7g3956 244 ProSiteProfiles Gnk2-homologous domain profile. 25 130 IPR002902 -
Tpr7g3956 244 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 10 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3956 Tpr-Chr7 48870296 48871045 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3956 27 243 Pollen Coat Proteome AT4G20670 39.301 4.38e-50 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3956 - - gmx:100527155 355.91