Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3937 ATGCAAACAAGTTTAATGATTCCGGCAAGTAACATGCCTTCAATCATCGGAAGAAACAACAACAACGTTGGTGTCTTTGGTTTTTCTTCATCTCTCTCTCTTGGCCAGCCAAATCTAATGGAAGCTGGACAACAACATCATCATCAACTTCTACCATTTGATATGACAACAAACAACAACAATACTTCAGAAAGTGATGTTCCAAGAATCCGTGAAGATGAATTATTTGATAGTGCTACAAAATCTGGTAATAGTGAAAATCAAGAAGCTGCTAATTCAGGCGATGATCAAGATCAACCTCGTGCTAAGAAGAAACGTTACCACCGTCATACACAGCATCAGATCCAAGAAATGGAAGCTTTTTTTAAGGAATGTCCTCACCCTGATGACAAGCAAAGGAAGGAACTAAGCAGAGAGTTAGGGTTAGAGCCATTGCAAGTGAAGTTTTGGTTTCAAAACAAACGTACTCAAATGAAGACTCAACAAGAGAGGCATGAGAATACTCAACTAAGAACTGAGAATGAGAAGCTTCGTGCCGATAACATGAGGTTTAGAGAAGCGCTTAGCAATGCTTCTTGTCCTAATTGTGGTGGTCCAACTGCTATTGGAGAAATGTCGTTCGATGAACATCACTTAAGGCTCGAAAATGCTCGCCTTAGAGAAGAGATTGATAGGATATCAGGCATTGCTGCGAAGTATGTCGGGAAGCCAGTGGTCAGTTATCCACTACTCTCCCCTTCATCGGTTCCACCTCGTCCTCTAGAACTCGGCATTGGTGGTTTTGGAGGACAACCAGGAATTGGTGGAGGAGATATGTATGGAGCCGGAGATCTTCTTAGGTCAATAAGTGGACCAACTGAAGCTGATAAACCAATGATAATTGAGCTAGCTGTTGCTGCAATGGAAGAACTCATTGGAATGGCACAAATGGGAGATCCTCTTTGGTTAACTACACTTGAAGGTGGTTCCATACTCAATGAAGAAGAATATGTTAGGTCTTTTCCTAGAGGAATTGGTCCAAAACCAGCTGGTTTTAAATGTGAAGCTTCAAGAGAAACTTCTGTTGTCATCATGAATCATGTTAACCTTGTTGAGATCCTCATGGACGTGAACCAATGGTCCACAGTTTTTTCTGGAATTGTTTCAAGAGCAATGACATTGGAAGTTCTATCAACTGGGGTGGCAGGCAACTACAATGGTGCATTACAAGTGATGACAGCAGAACTTCAAGTACCTTCACCACTAGTGCCAACTAGAGAGAGTTATTTTGTAAGGTATTGTAAGCAACATTCTGATGGTACTTGGGCAGTTGTGGATGTTTCTTTGGACAATTTGCGCCCTAGCCCTTCTGCTAGATGTAGAAGAAGGCCTTCTGGTTGCTTAATTCAAGAAATGCCCAATGGCTACTCAAAGGTTATATGGGTGGAGCATGTAGAAGTGGATGATAGAGGTGTTCATAATCTATACAAACAACTTGTTAGCTCAGGACATGCATTTGGTGCAAAACGTTGGATTGCAACCTTAGATCGACAATGTGAAAGACTTGCTAGTGCCATGGCAACCAACATTCCCACAGTCGATGTCGGCGTGATAACAAACCAAGATGGAAGAAAGAGCATGTTAAAACTAGCTGAAAGAATGTGCATAAGCTTTTGTGCTGGAGTGAGTGCTTCAACAGCACACACGTGGACAACACTTTCGGGTACAGGAGCTGATGATGTAAGGGTAATGACCCGTAAAAGTGTAGATGACCCAGGAAGACCAGCTGGCATTGTCCTTAGTGCTGCAACTTCTTTTTGGCTTCCAGTTACACCAAAAAGAGTTTTTGAATTTCTTAGAGATGAAAACTCAAGAAGTGAGTGGGATATCCTTTCCAATGGTGGAGTTGTTCAAGAAATGGCACATATTGCCAATGGAAGAGATACTGGAAATTGTGTTTCTCTTCTTCGAGTGAATAGTGCAAATTCAAGCCAAAGCAACATGTTGATATTACAAGAGAGTTGCACAGACACAACAGGTTCATTTGTGATCTATGCACCTGTAGACATAGTTGCAATGAATGTGGTACTAAATGGAGGTGATCCAGATTATGTAGCACTTCTTCCATCTGGATTTGCTATACTTCCTGATGGTGGTGTTGGTGGTGAAAATGGAAATGGTGGATCTTTATTAACAGTTGCATTTCAAATATTGGTTGATTCTGTGCCTACTGCAAAACTTTCACTTGGATCTGTTGCTACAGTTAATAATCTTATTGCTTGTACTGTTGAAAGGATTAAGGCTTCTTTGTCAGGTGAAGTTGCTTGA 2307 0.4131 MQTSLMIPASNMPSIIGRNNNNVGVFGFSSSLSLGQPNLMEAGQQHHHQLLPFDMTTNNNNTSESDVPRIREDELFDSATKSGNSENQEAANSGDDQDQPRAKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQQERHENTQLRTENEKLRADNMRFREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISGIAAKYVGKPVVSYPLLSPSSVPPRPLELGIGGFGGQPGIGGGDMYGAGDLLRSISGPTEADKPMIIELAVAAMEELIGMAQMGDPLWLTTLEGGSILNEEEYVRSFPRGIGPKPAGFKCEASRETSVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHSDGTWAVVDVSLDNLRPSPSARCRRRPSGCLIQEMPNGYSKVIWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWIATLDRQCERLASAMATNIPTVDVGVITNQDGRKSMLKLAERMCISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPAGIVLSAATSFWLPVTPKRVFEFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDTTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGGVGGENGNGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSGEVA* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3937 768 CDD START_ArGLABRA2_like 290 513 - -
Tpr7g3937 768 SMART HOX_1 102 165 IPR001356 GO:0003677
Tpr7g3937 768 Gene3D - 89 178 - -
Tpr7g3937 768 MobiDBLite consensus disorder prediction 81 95 - -
Tpr7g3937 768 MobiDBLite consensus disorder prediction 81 113 - -
Tpr7g3937 768 ProSiteProfiles START domain profile. 286 517 IPR002913 GO:0008289
Tpr7g3937 768 SUPERFAMILY Homeodomain-like 90 162 IPR009057 -
Tpr7g3937 768 SUPERFAMILY Bet v1-like 534 760 - -
Tpr7g3937 768 ProSitePatterns 'Homeobox' domain signature. 136 159 IPR017970 GO:0000981|GO:0006355
Tpr7g3937 768 SMART START_1 295 514 IPR002913 GO:0008289
Tpr7g3937 768 SUPERFAMILY Bet v1-like 286 516 - -
Tpr7g3937 768 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 56 765 - -
Tpr7g3937 768 Pfam START domain 296 514 IPR002913 GO:0008289
Tpr7g3937 768 Coils Coil 160 187 - -
Tpr7g3937 768 CDD homeodomain 104 162 IPR001356 GO:0003677
Tpr7g3937 768 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 56 765 IPR042160 -
Tpr7g3937 768 Gene3D - 341 511 IPR023393 -
Tpr7g3937 768 Pfam Homeodomain 104 159 IPR001356 GO:0003677
Tpr7g3937 768 ProSiteProfiles 'Homeobox' domain profile. 101 161 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3937 Tpr-Chr7 48693448 48701198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3937 57 768 Homeobox Transcription Factor Family AT1G05230 79.057 0.0 1137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Tpr7g3937 START 2.3e-58 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3937 K09338 - gmx:100797992 1302.73