Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3923 ATGGCTAGAATAATAATCTCCAACAACAATACTAATAACAATGTTGAGGTGGACATTGAGTCATCAAAAGATGATGTTGATGCAAAAACTGGCATGAAGAAGGGACCATGGACCCCACAAGAAGATATGATTTTGATAGAGTACGTGAATAAGCATGGTGAAGGGAATTGGAATTCTGTTCAGAAAAATTCAGGATTGTTAAGGTGTGGAAAAAGCTGCAGACTTAGATGGGCCAATCATTTAAGGCCCAATCTTAAGAAAGGTTCATTTTCTGAAGATGAAGAAAAAATCATCATTGAACTTCATGCTAAGCTTGGAAACAAATGGGCTAGAATGGCTGCTCAGTTGCCAGGAAGAACGGATAATGAAATAAAAAACTTTTGGAACACCAGAATGAAAAGGCGTCAGAGAGCAGGATTACCTCTTTACCCTCCTGAAGTCCAAGCAGAAGCTATTGCATACAATAATCATCTAATGAAAGAATATCACCATACTTTAGATGAACCTTTATCTTCTTCATCACCATCATTTTCTTTACTCTTATCTTCATGTTACCCTAAGAATATTGATAATGATCAAAACAATCATGATTATAATCCTATGCAAAACAACTCTGATTCTTCTAATCATTACACCAATCCATCTCCACAATTCAACTTTTCCAATGATCATGAAAATTTAGAGATCAATGAAACTCATGCATTGCCAAATTCACCTTCACTTTCTCCTTATCCATCTTCATCATCAAATCTTATCAACCATAGTTTTGGTAATCCAAATGATTCACATGATTACCAATATTCTGAAAATTTGAGCTATGATCAACATGGATTCAATGCAAGGTCTTTGTATGATTCTGAAACTCCTGTTTCATCTTATGCTAGTGGTGTTGATGGTTTGATGGGAAATTCAAACATGGTTAATGATTGCTATGAAGATCATGCACCACTATCTCCTAAAGGAAACAATAGTGGACTTTTGGATGATCTTGTGATGGAAGGTAGAAATATTTCATGCAATGATAAGGCTAGGAGTGAGGATTCAACATTTAGGGGGAATGAATCTTATAAGAGGAAAAGAATGGAGGGTGAGGAATATGATGAAGAAAGAGACATCATTCCTTTGATGAAGAAGAGGATTGTTGATGAGACTCAGAAGAAAGATTTTAGCTCTTCTCAATTGCCAACAGGGAAGAAACCAATTGAAGAGGATCCATTAGCAGGGATGAATTCAGTGTATGATGATGACTTGGATTGCTTGCTCAACAATTTTCCCTCAGAAATACCAATGCCTGAATGGTATTGTAGAGGAAAAAGCCAATCTTTGGGACTTGAAACTCAAACTGATCATGCTTCTTCATCATCTGTCCCCAACAATCAAGAATTTGCTTGGACTCTTGGATCAACTTGGAGCAACATGCCTGGAATATGTTAA 1434 0.364 MARIIISNNNTNNNVEVDIESSKDDVDAKTGMKKGPWTPQEDMILIEYVNKHGEGNWNSVQKNSGLLRCGKSCRLRWANHLRPNLKKGSFSEDEEKIIIELHAKLGNKWARMAAQLPGRTDNEIKNFWNTRMKRRQRAGLPLYPPEVQAEAIAYNNHLMKEYHHTLDEPLSSSSPSFSLLLSSCYPKNIDNDQNNHDYNPMQNNSDSSNHYTNPSPQFNFSNDHENLEINETHALPNSPSLSPYPSSSSNLINHSFGNPNDSHDYQYSENLSYDQHGFNARSLYDSETPVSSYASGVDGLMGNSNMVNDCYEDHAPLSPKGNNSGLLDDLVMEGRNISCNDKARSEDSTFRGNESYKRKRMEGEEYDEERDIIPLMKKRIVDETQKKDFSSSQLPTGKKPIEEDPLAGMNSVYDDDLDCLLNNFPSEIPMPEWYCRGKSQSLGLETQTDHASSSSVPNNQEFAWTLGSTWSNMPGIC* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3923 477 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 206 477 - -
Tpr7g3923 477 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 10 251 - -
Tpr7g3923 477 CDD SANT 36 81 IPR001005 -
Tpr7g3923 477 CDD SANT 89 130 IPR001005 -
Tpr7g3923 477 SUPERFAMILY Homeodomain-like 31 128 IPR009057 -
Tpr7g3923 477 ProSiteProfiles Myb-like domain profile. 82 132 IPR001005 -
Tpr7g3923 477 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 81 IPR017930 -
Tpr7g3923 477 ProSiteProfiles Myb-like domain profile. 29 81 IPR001005 -
Tpr7g3923 477 PANTHER TRANSCRIPTION FACTOR MYB28-LIKE 206 477 - -
Tpr7g3923 477 PANTHER TRANSCRIPTION FACTOR MYB28-LIKE 10 251 - -
Tpr7g3923 477 Gene3D - 33 86 - -
Tpr7g3923 477 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 136 IPR017930 -
Tpr7g3923 477 Pfam Myb-like DNA-binding domain 87 130 IPR001005 -
Tpr7g3923 477 Pfam Myb-like DNA-binding domain 34 81 IPR001005 -
Tpr7g3923 477 Gene3D - 89 135 - -
Tpr7g3923 477 SMART sant 33 83 IPR001005 -
Tpr7g3923 477 SMART sant 86 134 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3923 Tpr-Chr7 48527481 48531010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3923 31 152 MYB Transcription Factor Family AT2G32460 86.066 1.37e-72 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr7g3923 Myb_DNA-binding 7.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3923 K09422 - gmx:100784779 470.314