Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3916 ATGGATACCACAATTAACAACAATAACAAAAACAAAAACAAGTCTCCATCTACAACAATCCCTTTTCAAGTCAACCTTACCTCTTCTAATGACTCACTTTCTGATCATGATGAAAACAGACCCATCATCAATGAACTTGACTTTTTCTCTACAAATAACCATGAAAATATTGCCTCTTCTTCCACTTCTGCACCTCCCTATCATCATATACATGATCATTACACCAATCCTTCTTCTCTCTTGGAATTGAAAGTAAACACTAGTTTGAATCTTCTTACCACCAACGCAAGCAATGATCAATCCATGGTGGATGCTGACATACCAAGTAATTCAGAAGACAAAAGAGGTCAACTTGAGGCCGTTGTTCTTCAAGGTGAGCTTGAGAGATTGAAGGTAGAGAATCATCAATTGAGGAACATGCTCGAAGAGCGCAATCGGAATTACAGCACATTGCAGATGCATTTGGTGAGTTTGATGCAAGAGAGAAAGGTAGAGGATTGTAATGAAGATAAAAAACAAGTAGAGATGAAACAAAATGGAAATGGTGGATTTTTGGTTCCAAGGCAATTTATGGATCTTGGATTAGCTACTAATAATTCTAATGTTGCTGCTGATGAACCAAGAAGTCAAGATCAGTCAAAAGCAGTTGGAAACAACAATGAAGAAGGTTCCAAGGATGAAGCACTTGTGCCTGATCATGATATGAAGGAATCTGATAAGGGAAATGAACGAGACGATAGTCCTCCGAATCGAGTTTTACCTGCTAATAATAGTAATAATGTTCCAAATTTTAGTCCTCAAACTAATGTTGAACAAGCTGAGGCTACCATGAGGAAAGCACGAGTTTCGGTTAGGGCTCGATCGGAGGCTGCTATGATCAATGATGGATGCCAATGGAGAAAGTATGGACAGAAAATGGCGAAAGGAAACCCATGTCCTCGAGCTTATTATCGATGCACTATGGCTCACGGCTGTCCAGTGAGAAAACAGGTACAAAGGTGTGCTGAAGACAGATCAATACTCATAACAACATATGAAGGAAATCACATTCATGCATTGCCACCAGCAGCTATGGAAATGGTACAAACAACATCAGCAGCTGCAAGAATGCTTTTATCAGGACCAATGACAAGTCCTGATGGCCTAATGAATCCAAATTTCCTCACAAGAGCAATCCTTCCTTATTCATCAAGCATAGCAACTATCTCGGCCTCAGCACCATTTCCAACTGTTACATTAGACTTAACCGAACCACCAAATTCAAACCAATTCCCTAACAATAAGAACACAAATCAGTTCCAATTTCCGTTCGCTCAAAATTTTGCAAACTCATTACTACCTCAGATATTCGGTCAAACATTGCTTAACCAAACAACATTTTCAGGACTTCAGATGTCACAAGATGGAGAAAATTCTCAATTGGGTAATCAATCTCAGCAACAACTTGCTGACACAGTTACTGCCATTGCATCTGATCCTAACTTCACTACAGCATTGGCAGCTGCTATTACTTCCATTATTGGAGCTGCACAACCAAACAATGGTAACAACAGTACTATTAATAATGGTAACAGTACTATAGCCAACAATAATAATGGCAATGTTACATCTAATAACAATGCCAATGGAAGCAATAAAGGCAACAATCCTAATTCATCAGGAAACTAG 1668 0.3897 MDTTINNNNKNKNKSPSTTIPFQVNLTSSNDSLSDHDENRPIINELDFFSTNNHENIASSSTSAPPYHHIHDHYTNPSSLLELKVNTSLNLLTTNASNDQSMVDADIPSNSEDKRGQLEAVVLQGELERLKVENHQLRNMLEERNRNYSTLQMHLVSLMQERKVEDCNEDKKQVEMKQNGNGGFLVPRQFMDLGLATNNSNVAADEPRSQDQSKAVGNNNEEGSKDEALVPDHDMKESDKGNERDDSPPNRVLPANNSNNVPNFSPQTNVEQAEATMRKARVSVRARSEAAMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAHGCPVRKQVQRCAEDRSILITTYEGNHIHALPPAAMEMVQTTSAAARMLLSGPMTSPDGLMNPNFLTRAILPYSSSIATISASAPFPTVTLDLTEPPNSNQFPNNKNTNQFQFPFAQNFANSLLPQIFGQTLLNQTTFSGLQMSQDGENSQLGNQSQQQLADTVTAIASDPNFTTALAAAITSIIGAAQPNNGNNSTINNGNSTIANNNNGNVTSNNNANGSNKGNNPNSSGN* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3916 555 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 16 534 IPR044810 GO:0003700
Tpr7g3916 555 MobiDBLite consensus disorder prediction 1 20 - -
Tpr7g3916 555 PANTHER OS05G0567200 PROTEIN 16 534 - -
Tpr7g3916 555 MobiDBLite consensus disorder prediction 203 274 - -
Tpr7g3916 555 Gene3D WRKY domain 278 355 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr7g3916 555 SMART WRKY_cls 293 353 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr7g3916 555 SUPERFAMILY WRKY DNA-binding domain 286 354 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr7g3916 555 Pfam WRKY DNA -binding domain 294 351 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr7g3916 555 ProSiteProfiles WRKY domain profile. 288 354 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr7g3916 555 MobiDBLite consensus disorder prediction 203 219 - -
Tpr7g3916 555 MobiDBLite consensus disorder prediction 225 247 - -
Tpr7g3916 555 Coils Coil 120 147 - -
Tpr7g3916 555 MobiDBLite consensus disorder prediction 251 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3916 Tpr-Chr7 48435249 48439559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3916 37 515 WRKY Transcription Factor Family AT1G62300 46.894 2.11e-122 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr7g3916 WRKY 1.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3916 - - gmx:100127384 556.599