Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3901 ATGTCAATGGATATGAATATGATGGGTAATGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACTACTCTAGCGGTTAGTGTTCCATGCAGCAGCTTGTTGACTATAGTGACAGTTAGATGTGGGCATTGTGCTAATTTGCTTTCAGTTAACATGGGAGCAGCATCATCACTTCAATCTTTTCCTCCTCAACAAGATCATCATCCTCAGAAACAGCAGCTTGTAAACTGTCATCAAGAAGCAAGTAGGAAGGAAGTTGTAGGATCATCATCTTCTTCATCTTCAAAATCCAAAGCTTTTCAGCATTTAATCCATGAGCAACCTAGGACTCCTCCGATTCGTCCTCCTGAGAAAAGACAACGTGTTCCTTCTGCTTACAATCGGTTCATTAAGGAGGAAATACAAAGAATTAAGGCTGGTAATCCAGATATAAGTCACAGAGAAGCATTTAGCACAGCAGCTAAAAACTGGGCACATTTTCCTCACATTCACTTTGGATTAAAGTTGGATGCTAGCAAGCAAGCAAAATTGGACCATGGGGTTGGGGAGGCTACTCAAAAGTCTAATGGATTTTATTGA 582 0.4055 MSMDMNMMGNERVCYVHCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLLSVNMGAASSLQSFPPQQDHHPQKQQLVNCHQEASRKEVVGSSSSSSSKSKAFQHLIHEQPRTPPIRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSTAAKNWAHFPHIHFGLKLDASKQAKLDHGVGEATQKSNGFY* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3901 193 Gene3D High mobility group box domain 106 178 IPR036910 -
Tpr7g3901 193 SUPERFAMILY HMG-box 108 161 IPR036910 -
Tpr7g3901 193 Pfam YABBY protein 10 168 IPR006780 GO:0007275
Tpr7g3901 193 PANTHER PROTEIN YABBY 6-RELATED 5 193 IPR006780 GO:0007275
Tpr7g3901 193 PANTHER AXIAL REGULATOR YABBY 2-RELATED 5 193 - -
Tpr7g3901 193 MobiDBLite consensus disorder prediction 81 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3901 Tpr-Chr7 48254149 48262127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3901 1 193 C2C2-YABBY Transcription Factor Family AT1G08465 63.077 2.04e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Tpr7g3901 YABBY 3.5e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3901 K25796 - gmx:100785458 276.944