Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3888 ATGGGTTTTTTGTTGAAAGAAGTTTTGAAGACTTTGTGTGGTAGTAATCAATGGTCTTATGCTGTGTTTTGGAAGATTGGTTGCAACAATTCTAAGCTATTAATATGGGAAGAATGCTATTATGAACCCTTGTCATGTCCTTCCCCTCACGGCATTGTTGGGATGCCAAATTTGCCTAATCCTAACGGGGAAGGGTGCTGGTTTTCTTCTGAGTCTCAATCGTCTCATCTAGGAATACAAGAGGAGGATAGAGTCTCTTCTTTGATTAGCAAAATGACGGTCAATAATCTAGTCATTGTTGCAGGTGAAGGTATAATTGGACGTGTTGCATTTACCAACAGTCATGAATGGATTCTCTTGAACAATTTTGCTAAAAGTGCATATCCACCTGAGGTATATGCTGAAATGCATCAGCAATTTTCAGCTGGAATGCAGACAGTAGCAGTAATTCCTGTGCTTCCGCACGGGGTTATTCAACTTGGTTCTTTCTATCCGATAATGGAGAATATGGGATTTGTGCATGAAGTAAAGAGCCTGATCTTGCAACTAGGGTGTATTCCTAATGCCCTTCTATCCGAGGACTATTCAGCTAAACTTTCACATGAAAGACTTGATGGACGTGCTACTTCCGGTGTGCCTGGTACATCAGTCATTACCTCAAATTCCACTCCTTCAGTGGTTAATGGCTCCAATCAGCAAAGTTATTCATTTCATGCTTCAAAGCCTATTGTTCAAAGACATGATAGAGTTGTGGAAGCTAAAGTAATACCCTCAAATTTCAATTCAAATCTGCAAAAGCATTCTGTTTCATATAACGGAAGATCTGAATTCAATAACTTAGCTGGTTCTGAGCCGTTTGGTCTATCAGGTCCAAGTGATTATAACCTAAAATATATGGAACAACAAATCTTATCAGCAGTTGGGAATCAAGATAATGTTAATCCTTGTATTAATGTGTCAAGTTCCCTAAACATTTCTCAACTAAAAACGGACGGAAGCCATAACGTTGGCGGTGGCAGTACTTCATTTCTTAGAGGAATCCCAGTACACGGTGGGATGAATAGTCTATTGAGGACAAATCTGATTACTAGTTCAGAATCACTGAATGATAGTTCAAATTTGACTGGTCGATCAGGTGTCGTTCACATGCCTCTAGAATGTTCTGATCAGAAGATTCTTCCCGAAGTTTCAAACTTTGCTTCAAGAGGTCAAAAGATAGACTATGACATGCTTCAGGCCTCTAACATCACCTTTTTTAATCCGGCGGAACATGTGCCTATTAATAGTCATATCCCTGGTTTTGATCATGATTGCTTTCAGAAAGATGGTGGTACTAATCAATCTGTGATGACAACGAATCCTAAACACGAGGAAACTTGTGCTCAACAATCTCCATCGGGCGGTGACGACCTGTTTGATATTTTAGGTGTTGATTTTAAAAACAAACTTCTCAAAGGACACTGGAATGAACTGTTTGCTGATGAATCAGATGCCAATGCTGAAAATATGGTTAAAAAGGAAATATCTACGAACAAAGAGGGTACAGATTCTGGTTATTATTCAGTTAACGAATCAATGTTGGACAGTGGCATTTTTTCTGGCATGTCAACAGACAACCTCTTAGATGCTGTGGTCTCAAAGGCCCAACGTCCTTTGATACATAATTCGGATGACATGTCTTGCAAGACAACCTTGACCGGGAATAGTAGTATCACCTCTATTCCCTCTCGTGTTTGCAAGCAGGTTATGTCCGGTAATTTCAAAGAGGGTTTGTTTGGTTTTTCGAAGAATGGAGGTAAAACGGGAGCCTTAGAAACTAGTTCTCTAAGGTCTGGTTGTAGCAAGGATGATACTGGAAACCTCTCTCAAACAACTACTATATGTGGTTCCCAACTTAGTTCATGGTTGGAGAATGGTGGCAATGTGAAGCGTGAAAATAGTGTTTCAACTGGATGCTCTAAGCGCCCGGACGAAGCTTGCAAACCTAATCGGAAAAGGCTTAAACCAGGTGAGAATCCCAGGCCTAGACCTAAAGATCGTCAAATGATTCAAGATCGCGTCAAAGAGTTACGAGAGATTGTTCCAAATGGAGCGAAGTGTAGCATAGATGCACTGCTGGAACGGACCATTAAGCATATGGGTTTCTTGCAAAGTGTGACAAAGCACGCCGACAAGCTGAAACAGACCGGGGATTCTAAGATCGTTAGTAACGAAGGTGGGCTGCTTTTGAAAGACAACTTTGTGGGAGGGGCTACATGGGCATATGAGGTTGGCTCCCAATCAATGGTTTGTCCGATTATAGTCGAAGATTTGAATCCGCCTCGTCAGATGCTAGTAGAGATGCTTTGTGAGGAACGCGGTTTCTTTCTAGAAATAGCTGACTTAATCAGAGGATTGGGCTTAACAATCTTAAAGGGGGTAATGGAAGCCCGCAACGACAAAATTTGGGCACGTTTCGTTGTTGAGGCAAACAGGGACGTAACGAGAATGGAAATATTTATGTCACTCGTTCGTCTTCTAGAGCAAACAATGAAGGGTAACGCGTCTTCTTCGAATGCAATTGATGACATGATAGGTTACAACACTTTACCACAGAAGGCCTAA 2604 0.4124 MGFLLKEVLKTLCGSNQWSYAVFWKIGCNNSKLLIWEECYYEPLSCPSPHGIVGMPNLPNPNGEGCWFSSESQSSHLGIQEEDRVSSLISKMTVNNLVIVAGEGIIGRVAFTNSHEWILLNNFAKSAYPPEVYAEMHQQFSAGMQTVAVIPVLPHGVIQLGSFYPIMENMGFVHEVKSLILQLGCIPNALLSEDYSAKLSHERLDGRATSGVPGTSVITSNSTPSVVNGSNQQSYSFHASKPIVQRHDRVVEAKVIPSNFNSNLQKHSVSYNGRSEFNNLAGSEPFGLSGPSDYNLKYMEQQILSAVGNQDNVNPCINVSSSLNISQLKTDGSHNVGGGSTSFLRGIPVHGGMNSLLRTNLITSSESLNDSSNLTGRSGVVHMPLECSDQKILPEVSNFASRGQKIDYDMLQASNITFFNPAEHVPINSHIPGFDHDCFQKDGGTNQSVMTTNPKHEETCAQQSPSGGDDLFDILGVDFKNKLLKGHWNELFADESDANAENMVKKEISTNKEGTDSGYYSVNESMLDSGIFSGMSTDNLLDAVVSKAQRPLIHNSDDMSCKTTLTGNSSITSIPSRVCKQVMSGNFKEGLFGFSKNGGKTGALETSSLRSGCSKDDTGNLSQTTTICGSQLSSWLENGGNVKRENSVSTGCSKRPDEACKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMGFLQSVTKHADKLKQTGDSKIVSNEGGLLLKDNFVGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFVVEANRDVTRMEIFMSLVRLLEQTMKGNASSSNAIDDMIGYNTLPQKA* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3888 867 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 179 IPR025610 -
Tpr7g3888 867 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 667 716 IPR011598 GO:0046983
Tpr7g3888 867 CDD bHLH_AtLHW_like 671 740 - -
Tpr7g3888 867 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 242 IPR043561 GO:0003700|GO:0006355
Tpr7g3888 867 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 372 867 IPR043561 GO:0003700|GO:0006355
Tpr7g3888 867 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 244 367 IPR043561 GO:0003700|GO:0006355
Tpr7g3888 867 MobiDBLite consensus disorder prediction 645 681 - -
Tpr7g3888 867 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 242 - -
Tpr7g3888 867 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 244 367 - -
Tpr7g3888 867 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 372 867 - -
Tpr7g3888 867 MobiDBLite consensus disorder prediction 657 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3888 Tpr-Chr7 48100180 48106799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3888 467 864 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 52.475 2.67e-112 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3888 - - cam:101492357 1201.81