Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3884 ATGGAAGTTATGTTGATAGAACAAGTTTCAAAATTGATACTTTTTTGTTCAATGATTACAATATGTTATGGTGCTACAAACCCTAATGATCTCAAAGTTTTGAATGATTTTAGAAAAGGGTTAGAAAATCCTGAACTTTTGAAATGGCCCGAAAAAGGTAACAATGATCCATGTGGTTCTCCTTCATGGCCTTATGTGTTTTGTTCTGATGATAGAGTCACTCAGATTCAAGCTAAGAATCTTGGTCTTAGAGGAAAATTGCCACAAAATTTTAACCAACTCTCAGAACTTTCCAATTTAGGTCTTCAACGAAACAATCTTACTGGTATGTTACCTAGTTTTCGTGGTTTATCAAAATTGGAATTTGCTTTCTTGGATTACAATTCATTTGATGCTATTCCTGTTGATTTCTTCAATGGACTAACAAGTCTTAGGATTTTGTCTTTGGAAGAAAATCAACTCAATGTGAGTACTAATGGTTGGTCATTTCCTGCGGATTTGGAGAATTCGTCACAGTTAACTGAACTTTCCTTTGTTCATTGTAATTTGGTTGGATCTTTGCCTGATTTTCTAGGCACATTGCCATCTCTCACTAGTCTAAGGCTTTCAAACAACAAACTTTCCGGTATGATTCCGGCTACTTTTGCTCAATCTTCAATTCAGGTTTTGTGGTTGAATAATCAAGAAGGAGAAAGCGGTTTTACAGGTTCTATTGATGCTATTGCTTCGATGGTTTTCTTAACACAGATTTGGCTACATGGAAACAAATTCTCAGGTACAATTCCAAACAATATTGGAAATCTCACTTCTTTGAAGGAACTCAATCTCAATAGTAACAAAATTGTTGGGCTGATTCCAAAATCCTTAGCCGAAATGAACCTTGATTCAGTTGTTTTGAACAATAACATGCTTATGGGTCCGATACCGAAGTTTAAAGCCGCAAACTTTTCTTATGATGATAATCTCTTTTGTCAAACTGAGCCAGGACTTGAATGTTCCTCAGAAGTTACAGCACTGCTTGATTTTCTGAATAATCTGAATTATCCATCGTTTCTGATTTCTGATTGGTCAGGTAATAAACCATGTACAAGTAGCACAGGACCATGGTTTGGATTAAGCTGCAACAATTCAAACTCTGGTGTATCTATTATTAATCTACCAAAACATAAGCTTAATGGTAGTTTAAGTCCCTCACTTGCTAAGTTAGATTCACTTCTTGAAATTAGGCTCGCTGGAAATAATATAACCGGCGCAGTTCCTAGTGATTTTACTAAATTGAAATCGTTGAGGTTGTTGGATTTAACTGATAATAATATTGAATCTCCTTTGCCAAATTTTCATGAGGGTGTGAAAGTTATTACTGTCGGTAACCCCTTTCTAATTAATAATCACACTGGAGGGAGTGTTAGTCCTACTATTAGTGGCAACAGTGGACCGAGTTCGGAGAACAACCCTTCACATTCTCCATCTTCACTGAACCAGCCGGTTCCGAGCTCAAATCATAAAATATTCAAGACAGTGGCAACAGTGGCTGGAGTTGCAGGGTTTGCAGTTGTAGCTTTTTTGGTTGTTTTATGTTTCTTTAAGAACAAGAAAGCATCGTCGGATGCTCCAAGTTCCATTGTGGTTCACCCTCGAGATCCTTCTGATCGAGGAAGTATAGTTAAAATTGCGGTTTCAAGCAAAAACACTGGAAGCTTATCAGGAAAAACTGGCTCAAGTTCACTGAGTAGCTTAAGTGGTGAAACTCAAAACTCTTACTTAATTGAGGCTGGTAAGAATGTCATATCGGTGCAAGTGCTACGCAAGGTTACTAACGATTTTGCATCGGAAAATGAGCTAGGCCGCGGTGGATTTGGGACTGTTTACAAAGGGGAGTTAGAAGATGGAACCAATATAGCAGTAAAGAGAATGGAGAATGGAGTTATTGGCAATAAGGCATTGGATGAGTTTCAATCAGAAATAGATGTTCTTTCTAAGGTTCGTCACCGACATTTGGTATCTCTTTTAGGGTATTCCATTGAAGGCAATGAGAGACTTTTAGTTTATGAATATATGCCACTTGGTGCTCTGAGTCAACATCTTTTTCATTGGAGAAAATTCGCGTTGAAGCCTTTATCTTGGTCACAAAGGCTTGTAATAGCACTAGATGTTGCTAGAGCGATGGAATATCTTCATGGTCTTGCTCGCGAGACCTTTATTCATAGAGATCTCAAGTCTTCTAATATTCTACTAGGCAATGATTTTCGCGCAAAAGTTTCGGATTTTGGTCTTGTGAAGCTTGCCCCGAATGGCGAAAAATCTATAGTAACCAAACTTGCCGGGACATTTGGTTACCTTGCCCCTGAATATGCTGTGATGGGGAAAATCACCACAAAAGTTGATGTGTTCAGCTACGGCGTGGTATTAATGGAACTTCTAACCGGACTAACGGCGCTTGACGAGAGCCGGTCAGAGGAAATCCGATACTTGGCCGAATGGTTTTGGCGAATTAAATCAAACAAAGAAAAGCTTATGTCTGCCATTGATCCAGCTTTGGAACCAAATGAAGAAACATATGAAAGTATAACTATTGTAGCAGAACTTGCCGGACATTGCACTGCTAGGGAAGCATACCATAGGCCAGATATGAGTCATGCTGTCAATGTATTAGGAGCATTAGTGGAGAAATGGCGACCGGTTAACGATGAACTCGATTGCTATTCCGCAATTGACGACACTCAACAACTTCCTCAATTGTTGAAAATTTGGAAGGATGCAGAACGCAATGAGTTTAGCTATAGTACTACTGCTAGTCTTGAAGACAGTAAAGGAAGTATTGCATTGAGGCCTACTGGATTTGCTGATTCTTTCACTTCTAATGATGCTAGATGA 2874 0.3869 MEVMLIEQVSKLILFCSMITICYGATNPNDLKVLNDFRKGLENPELLKWPEKGNNDPCGSPSWPYVFCSDDRVTQIQAKNLGLRGKLPQNFNQLSELSNLGLQRNNLTGMLPSFRGLSKLEFAFLDYNSFDAIPVDFFNGLTSLRILSLEENQLNVSTNGWSFPADLENSSQLTELSFVHCNLVGSLPDFLGTLPSLTSLRLSNNKLSGMIPATFAQSSIQVLWLNNQEGESGFTGSIDAIASMVFLTQIWLHGNKFSGTIPNNIGNLTSLKELNLNSNKIVGLIPKSLAEMNLDSVVLNNNMLMGPIPKFKAANFSYDDNLFCQTEPGLECSSEVTALLDFLNNLNYPSFLISDWSGNKPCTSSTGPWFGLSCNNSNSGVSIINLPKHKLNGSLSPSLAKLDSLLEIRLAGNNITGAVPSDFTKLKSLRLLDLTDNNIESPLPNFHEGVKVITVGNPFLINNHTGGSVSPTISGNSGPSSENNPSHSPSSLNQPVPSSNHKIFKTVATVAGVAGFAVVAFLVVLCFFKNKKASSDAPSSIVVHPRDPSDRGSIVKIAVSSKNTGSLSGKTGSSSLSSLSGETQNSYLIEAGKNVISVQVLRKVTNDFASENELGRGGFGTVYKGELEDGTNIAVKRMENGVIGNKALDEFQSEIDVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPLGALSQHLFHWRKFALKPLSWSQRLVIALDVARAMEYLHGLARETFIHRDLKSSNILLGNDFRAKVSDFGLVKLAPNGEKSIVTKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLTALDESRSEEIRYLAEWFWRIKSNKEKLMSAIDPALEPNEETYESITIVAELAGHCTAREAYHRPDMSHAVNVLGALVEKWRPVNDELDCYSAIDDTQQLPQLLKIWKDAERNEFSYSTTASLEDSKGSIALRPTGFADSFTSNDAR* 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3884 957 ProSitePatterns Protein kinases ATP-binding region signature. 614 636 IPR017441 GO:0005524
Tpr7g3884 957 SMART LRR_typ_2 268 291 IPR003591 -
Tpr7g3884 957 SMART LRR_typ_2 426 448 IPR003591 -
Tpr7g3884 957 SMART LRR_typ_2 402 425 IPR003591 -
Tpr7g3884 957 SMART LRR_typ_2 94 116 IPR003591 -
Tpr7g3884 957 SMART LRR_typ_2 117 140 IPR003591 -
Tpr7g3884 957 SMART LRR_typ_2 194 217 IPR003591 -
Tpr7g3884 957 SMART LRR_typ_2 141 164 IPR003591 -
Tpr7g3884 957 Gene3D Ribonuclease Inhibitor 334 464 IPR032675 -
Tpr7g3884 957 SUPERFAMILY Protein kinase-like (PK-like) 586 884 IPR011009 -
Tpr7g3884 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 733 745 IPR008271 GO:0004672|GO:0006468
Tpr7g3884 957 ProSiteProfiles Protein kinase domain profile. 608 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3884 957 Pfam Leucine rich repeat N-terminal domain 334 375 IPR013210 -
Tpr7g3884 957 Pfam Leucine rich repeat N-terminal domain 28 69 IPR013210 -
Tpr7g3884 957 PANTHER OSJNBA0070M12.3 PROTEIN 8 957 - -
Tpr7g3884 957 Gene3D Ribonuclease Inhibitor 28 329 IPR032675 -
Tpr7g3884 957 Gene3D Transferase(Phosphotransferase) domain 1 686 904 - -
Tpr7g3884 957 MobiDBLite consensus disorder prediction 472 496 - -
Tpr7g3884 957 SUPERFAMILY L domain-like 26 311 - -
Tpr7g3884 957 SUPERFAMILY L domain-like 333 447 - -
Tpr7g3884 957 CDD STKc_IRAK 614 884 - -
Tpr7g3884 957 Gene3D Phosphorylase Kinase; domain 1 571 685 - -
Tpr7g3884 957 SMART serkin_6 608 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3884 957 Pfam Protein kinase domain 610 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3884 957 PANTHER OSJNBA0070M12.3 PROTEIN 8 957 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3884 Tpr-Chr7 48043041 48047255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3884 85 877 Receptor kinase-like Gene Family AT1G55610 29.426 8.80e-76 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Tpr7g3884 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3884 - - cam:101493565 1530.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3884 7 48043041 48047255 Tpr7g3884 7 48043041 48047255 ECH