Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3876 TTCCTTTGTAGCTACAAAGTTAATATTTTCAACTTCAACAAAAGTAGGCTCATGAAAACATTATTCTCATCCAACAAAAGTTGTGGCAATTGTCTCAAATTACAACCCTCAGATGTACTTGAGCCCAAAATCTCCATATACCAAAATACAAACCCTAGCCGTCTCACTTCCTCCACCACCAATTCCCGCGAGGACAATGCTGACAAAAAAGTTTTCGCTTCCACCACCATCTCAAAAGCTGACACTATTTATCACAACGACGACACATTGAATCATAGTATTCTAAAATCGGGCACAAAACTCATCGATAGCATTGCTGTTGAGAAGGACTCGCATGATCCACATGAAGATTTTCGAAACTCCATAGTTCAAATGATATTAGAGAGAGAGATCTACTTAGAAAGAGATCTTGAAGAACTTCTTGAATGCTTTCTTCAACTTAATGCAAAGTGTCACCACCAAGTCATTGTTCGAGCTTTCATGGAGATTTGTGAAGAAATATTCCCTAAAAAGTTTCATGGTGATGAAGCATCTTAA 537 0.378 FLCSYKVNIFNFNKSRLMKTLFSSNKSCGNCLKLQPSDVLEPKISIYQNTNPSRLTSSTTNSREDNADKKVFASTTISKADTIYHNDDTLNHSILKSGTKLIDSIAVEKDSHDPHEDFRNSIVQMILEREIYLERDLEELLECFLQLNAKCHHQVIVRAFMEICEEIFPKKFHGDEAS* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3876 178 ProSiteProfiles OVATE domain profile. 107 166 IPR006458 -
Tpr7g3876 178 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 11 175 - -
Tpr7g3876 178 Pfam Transcriptional repressor, ovate 111 168 IPR006458 -
Tpr7g3876 178 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 105 166 IPR006458 -
Tpr7g3876 178 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 11 175 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3876 Tpr-Chr7 47968418 47969279 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tpr7g3876 Ovate 9.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3876 - - mtr:MTR_5g079710 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3876 7 47968418 47969279 Tpr4g1481 4 14566058 14567747 PCT