Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3863 ATGGAGGATCCACCAACTGGTTTTCGTTTCTACCCAACAGAAGAAGAACTAGTTGGATTCTATCTACACAACCAGCTTGAAGGACAAATGCATCATCACATAAACAGAGTTATCCCTGTCATTGATATCAATGCCAAAGAGCCATGGGATCTTCCAACATTTGCAGGGGAGAAATGTCGTGGAGAGACAGAGCAATGGTTTTTCTTTTCACCAAGACAAGAGAGAGAGTTGAGAGGAGGAAGACCTAATAGAACAACATCTTGTGGATATTGGAAGGCCACAGGTTCACCAAGCTATGTTTACTCTTCTAAAAACAAAGTGATTGGGATAAAGAAAACCATGGTGTTTTACAAAGGGAAAGCTCCTTCTGGAAGGAAAACCAAATGGAAAATGCATGAATACAAAGCCATTGAACAACACTCTCCTTCCAACACAAACCCTCCTAAGTTGCGACACGAATTCAGCTTGTGTCGCATTTATGTGATATCGGGAAGCTTTTGTTCATTTGATCGAAGACCATTAGAAATGCCAAAAGTGGAGTTACAACTTGATCATAATGCTTCAACGTCTCAACAAGTGGTAGCAGAGCTCGATGAATCAAGTTTGTGCGCAACTACCCACTCGGGAGGGGCAGGAAGAAACCATGATGTTGCTCTTGTTGGAGGGTCAAGTGGAACAAATTGGAATAATGTAGCAAATAATGGAGTTGATGAACCTGAAGTACCTCTTTGGGAATGGGACCATCTAAATTGGATGTAA 759 0.4163 MEDPPTGFRFYPTEEELVGFYLHNQLEGQMHHHINRVIPVIDINAKEPWDLPTFAGEKCRGETEQWFFFSPRQERELRGGRPNRTTSCGYWKATGSPSYVYSSKNKVIGIKKTMVFYKGKAPSGRKTKWKMHEYKAIEQHSPSNTNPPKLRHEFSLCRIYVISGSFCSFDRRPLEMPKVELQLDHNASTSQQVVAELDESSLCATTHSGGAGRNHDVALVGGSSGTNWNNVANNGVDEPEVPLWEWDHLNWM* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3863 252 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 252 - -
Tpr7g3863 252 Pfam No apical meristem (NAM) protein 5 135 IPR003441 GO:0003677|GO:0006355
Tpr7g3863 252 Gene3D NAC domain 13 165 IPR036093 GO:0003677|GO:0006355
Tpr7g3863 252 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 5 252 - -
Tpr7g3863 252 SUPERFAMILY NAC domain 4 160 IPR036093 GO:0003677|GO:0006355
Tpr7g3863 252 ProSiteProfiles NAC domain profile. 4 162 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3863 Tpr-Chr7 47859025 47860909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3863 2 251 NAC Transcription Factor Family AT3G44350 51.984 1.11e-84 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr7g3863 NAM 1.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3863 - - gmx:100784960 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3863 7 47859025 47860909 Tpr7g3863 7 47859025 47860909 ECH
Tpr7g3863 7 47859025 47860909 Tpr4g1500 4 14781429 14784735 PCT