Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3857 ATGGCACCAAAGAAGGAGAAGGCTCCACCACCGTCGTCAAAGCCGGCGAAATCAGGAGGAGGAAAACAAAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAAAAGGTTAACAACATGGTGTTGTTTGATCAAGGTACCTATGATAAGCTTCTCACTGAAGCTCCTAAGTACAAACTCATCACTCCTTCAGTTCTCTCCGATCGTCTCAGGATTAATGGATCTTTGGCACGTCGTGCAATCAAGGACCTAATGGCAAGAGGTTTGATTAGATTGGTATCTGCTCATGCTAGTCAACAGATTTACACTAGAGCTACCAATACATAA 327 0.4373 MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKYKLITPSVLSDRLRINGSLARRAIKDLMARGLIRLVSAHASQQIYTRATNT* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3857 108 Gene3D - 21 108 - -
Tpr7g3857 108 PANTHER 40S RIBOSOMAL PROTEIN S25 2 108 IPR004977 -
Tpr7g3857 108 MobiDBLite consensus disorder prediction 1 36 - -
Tpr7g3857 108 PANTHER BNAA04G12260D PROTEIN 2 108 - -
Tpr7g3857 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3857 Tpr-Chr7 47815948 47816817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3857 1 108 Cytoplasmic Ribosomal Protein Gene Family AT2G21580 87.037 1.51e-54 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3857 K02975 - ming:122063087 156.377