Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3849 ATGTATCATCATCACCAACATCAAGGAAAAAATATCCATTCTTCTTCTAGAATGTCAATACCATCTGAGAGACACATGTTCCTTCAAACAGGAAATGGTTCTAGTGATTCAGGACTCGTACTCTCAACCGATGCTAAACCTCGATTAAAATGGACACCGGATCTTCATGCAAGGTTTATCGAAGCAGTTAATCAGTTAGGTGGAGCTGACAAGGCTACTCCAAAAACAGTAATGAAACTCATGGGAATTCCAGGGCTTACCTTATATCATCTAAAGAGTCATCTTCAGAAGTACAGATTGAGCAAGAATCTGCATGGACAAAGCAATAGTAATGTGACACACAAATTAACCACACATTCAGCTTCAGTAACTGATGAGAGACTTTCTGATCAAACCAATGGAACTCACATCAATAAATTAACCCTTGGACCACAACCTAATAATAACAAAGATATACACATAAACGAGGCGCTGCAGATGCAGATTGAGGTTCAGAGAAGACTCAATGAACAACTTGAGGTACAAAGACACTTGCAACTAAGGATAGAGGCTCAAGGAAAATACCTTCAATCGGTACTCGAAAAAGCTCAAGAAACACTTGGTAGACAAAACTTAGGAATAGTAGGACTTGAAGCTGCTAAAGTTCAACTCTCCGAGCTTGTGTCAAAAGTATCCTCACAGTGTCTGAATTCAACATTTTCAGAGATGAAAGAGTTACAAGGCTTTTGTCCTCAACCAAACGACGGCTCGATGGATAGTAGTTGCTTAACATCGTGCGACCGATCACAAAAAGAACAAGAGATTATTCAAAATGGAGGGTTTGGATTAAGACACTTCAACAACAATAACCATGAATTGGCAGGTTCTGTTCAAAACCTTAGAAACAATGAAGTACTAAAATGGTGTGTTGATGAAGTAAAAAAGAACAGTACTAATTTTCTCACCCCTTTAGGAAAGAATAATGATTTAGAAAGAAATCATGGAAATTTGTCTATGAACATTGGAGTTGAAACAAGAACAGAAACAATGAAATCAGTGGAGGATAATAATAAGATGCAACAATCTTCTAATTACTTTTCAGCTTCAAGATTGGATTTAAACAGTGGTGGAGATCATAATGAAGGTGCTACAAATTGCAAACAACTTGATTTGAATAGGTTCAGTTGGAACTGA 1173 0.3734 MYHHHQHQGKNIHSSSRMSIPSERHMFLQTGNGSSDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNSNVTHKLTTHSASVTDERLSDQTNGTHINKLTLGPQPNNNKDIHINEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGIVGLEAAKVQLSELVSKVSSQCLNSTFSEMKELQGFCPQPNDGSMDSSCLTSCDRSQKEQEIIQNGGFGLRHFNNNNHELAGSVQNLRNNEVLKWCVDEVKKNSTNFLTPLGKNNDLERNHGNLSMNIGVETRTETMKSVEDNNKMQQSSNYFSASRLDLNSGGDHNEGATNCKQLDLNRFSWN* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3849 390 Pfam MYB-CC type transfactor, LHEQLE motif 152 199 IPR025756 -
Tpr7g3849 390 Coils Coil 276 296 - -
Tpr7g3849 390 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 353 IPR044848 GO:0003700
Tpr7g3849 390 PANTHER MYB-RELATED PROTEIN 2 4 353 - -
Tpr7g3849 390 Pfam Myb-like DNA-binding domain 48 99 IPR001005 -
Tpr7g3849 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Tpr7g3849 390 Coils Coil 155 175 - -
Tpr7g3849 390 Gene3D - 45 103 - -
Tpr7g3849 390 SUPERFAMILY Homeodomain-like 45 101 IPR009057 -
Tpr7g3849 390 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3849 Tpr-Chr7 47762902 47765476 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3849 78 390 G2-like Transcription Factor Family AT3G04030 47.619 6.34e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tpr7g3849 Myb_DNA-binding 3.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3849 - - gmx:100810396 528.48