Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3847 ATGGCAAGTCAAAGAATAGGAGAGCTTGATTTTTCTGAGGCAGGACATTCAACTCATGATGTTCATTATGGAATTCATCATAGGATTAACAATTCTTCATCAAGCTTAATGAATGAAGGATCTGGTTTTGATTTTGGGGAGCTAGAAGAAGCAATAGTTATGCAAGGAGTTAAGAGTAGAAATGATGAAACAAAAGCATCTTTTTTCACAGCCAGACCTGCTGCTTCTGCTACACTGGAAATGTTCCCTTCTTGGCCAATGAGATTCCATCAATCCTCAACAGGAGGGAACAAATCAGGAGGGGAAAGCAGTGATTCAGCACTATCAAGCAAAAATGAGAACCCTTTTGAATCAGAATCATCACAATTAAGTTGTAAAAAAGCATCTTCATTTGATGAAGAGAATCTGCAGCTACAGCAACAGAATCAATCAGTAACAAAAGAAAAGTTACAGAAAAAGGGAGGTGGTTCAGCATCAGATAAGCCACTTGATGCAAAGACATTGAGACGTTTAGCACAAAACAGAGAAGCTGCAAGAAAAAGTCGCCTAAGGAAAAAGGCTTATGTGCAACAACTAGAGTCAAGTAGATTAAAGCTTGCACAATTGGAACAAGATCTTCAAAGAGCACGCTCTCAGGGTATGTTCATGGATTGGAATGGTGGTGTTGGAGGCAACATAAGCTCCGGAGGTGCAATGTTTGACATGGAATATGGAAGATGGTTAGAAGAAGACAACCGTTTATTAACGGAGTTAAGAAACGGATTAGAAGCGGGGTTAACAGATAATGAAATGAGAGTAATGGTGGATGGGTATTTATGTCATTATGATCAAATATTTAGAGTGAAGAGTGTCACTGCTAAATCAGATGTGTTTCATCTTATTAATGGCATCTGGACTTCTCAAGCTGAACGTTGTTTTCTTTGGATTGGTGGCTTTAGACCCTCTGAAATTATCATGATGTTGATCCAACAATTGGAGCCACTAGCAGAGCAGCAAATAATGGGAATGTATGGATTAAGACATTCATCACAGCAAGCAGAGGAAGCACTCTCTCAAGGACTTGATCAGTTGCAACAATCTCTTGTTGATACCATTGCTGGAGGACCCCTTGTTGATGGTGTTCAACAAATGGTTGTTGCCATGGGTAAACTTTCTAATCTTGAAGGATTTCTTCGCCAGGCTGATAATTTGAGGCAACAAACTCTTCATCAACTATGTCGATTACTCACACTTCGTCAAGCGGCACGCTCTTTTCTTGTTATTGGAGAGTACTATGGACGACTTCGAGCCCTTAGTTCTTTGTGGGCATCAAGACCACGAGAGACCATGATGAGTGATGATAATTCATGCCAAACAACTACAGACATGCAAATGGTTCAACCTTCTCAGAATCATTTCTCCAATTTCTGA 1410 0.4 MASQRIGELDFSEAGHSTHDVHYGIHHRINNSSSSLMNEGSGFDFGELEEAIVMQGVKSRNDETKASFFTARPAASATLEMFPSWPMRFHQSSTGGNKSGGESSDSALSSKNENPFESESSQLSCKKASSFDEENLQLQQQNQSVTKEKLQKKGGGSASDKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLAQLEQDLQRARSQGMFMDWNGGVGGNISSGGAMFDMEYGRWLEEDNRLLTELRNGLEAGLTDNEMRVMVDGYLCHYDQIFRVKSVTAKSDVFHLINGIWTSQAERCFLWIGGFRPSEIIMMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLDQLQQSLVDTIAGGPLVDGVQQMVVAMGKLSNLEGFLRQADNLRQQTLHQLCRLLTLRQAARSFLVIGEYYGRLRALSSLWASRPRETMMSDDNSCQTTTDMQMVQPSQNHFSNF* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3847 469 Coils Coil 185 212 - -
Tpr7g3847 469 MobiDBLite consensus disorder prediction 92 167 - -
Tpr7g3847 469 Gene3D - 165 214 - -
Tpr7g3847 469 MobiDBLite consensus disorder prediction 92 150 - -
Tpr7g3847 469 SMART brlzneu 162 254 IPR004827 GO:0003700|GO:0006355
Tpr7g3847 469 CDD bZIP_HBP1b-like 166 216 - -
Tpr7g3847 469 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 169 184 IPR004827 GO:0003700|GO:0006355
Tpr7g3847 469 ProSiteProfiles DOG1 domain profile. 230 438 IPR025422 GO:0006351|GO:0043565
Tpr7g3847 469 Pfam bZIP transcription factor 165 206 IPR004827 GO:0003700|GO:0006355
Tpr7g3847 469 PANTHER TRANSCRIPTION FACTOR TGA9 68 448 - -
Tpr7g3847 469 Pfam Seed dormancy control 248 321 IPR025422 GO:0006351|GO:0043565
Tpr7g3847 469 SUPERFAMILY Leucine zipper domain 166 207 IPR046347 GO:0003700|GO:0006355
Tpr7g3847 469 PANTHER TRANSCRIPTION FACTOR TGA9 68 448 - -
Tpr7g3847 469 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 164 208 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3847 Tpr-Chr7 47734657 47743975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3847 151 469 bZIP Transcription Factor Family AT1G08320 72.100 1.28e-177 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr7g3847 DOG1 1.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3847 K14431 - gmx:100775461 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3847 7 47734657 47743975 Tpr7g3847 7 47734657 47743975 ECH