Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3842 ATGGGTTTGAGGGATAAGTGCAATGTAGAAGACAAGAATTTATATCTTCAAACCCCAACTTTCATTGAATGGCTCAAACCATCTTCATCACTCTCATCTTCTCCTTCATCATCTTTAACTCATCAACAAGAAATATCTCAAGAAACTTTTCAATTTTTACCTATCTATAGTGGAATTAAATCCTTTGAGGAAAACCATGGGATGCAAAAAGAAGATTTAGAAGTAAAAGAAGAGAAAGTGGAACATGTGACTGTGGCTTTGCACATTGGATTGCCTAACATAGGAGGAGGTGAAACTAATAATCATGATGAAAAGAATAAGCTTTTTGATGAGAAGAATAAAGTTAATAAGGAAGAAGAATTAAAGAAAAACTTGCATGGTTTTTGTTTTAAGGAAGAAAAAAGGTTTTGGATACCAACTCCAGCTCAGATCCTTGTTGGACCTATGCAATTTGCTTGTTCCATATGCAACAAGACTTTCAATAGATACAACAATATGCAGATGCATATGTGGGGACATGGATCCGAATTCCGGAAAGGACCGGACTCACTTAAAGGAACACAACCAGCAGCAATGTTAAGACTACCATGTTATTGTTGTGCTAATGGTTGCAAGAACAACATCAATCATCCAAGAGCAAAACCATTGAAAGACTTTAGAACTCTCCAAACTCATTACAAAAGAAAGCATGGAACAAAACCATTTATTTGCAGAAAATGTTCTAAAGCATTTGCTGTTAAAGGTGATTGGAGAACTCATGAGAAAAATTGTGGAAAGTTTTGGTATTGCACTTGTGGTTCTGATTTTAAACACAAAAGATCTCTTAAAGATCATGTCAGATCCTTCGGAAAAGGTCACTCCCCAAATCCTTCTCTTGAAGGGTTCGAAGATGAGAAAGAATGCAGCAATACCGGATCTGATGATGATGAAGTTGCTCATGCATGA 945 0.3619 MGLRDKCNVEDKNLYLQTPTFIEWLKPSSSLSSSPSSSLTHQQEISQETFQFLPIYSGIKSFEENHGMQKEDLEVKEEKVEHVTVALHIGLPNIGGGETNNHDEKNKLFDEKNKVNKEEELKKNLHGFCFKEEKRFWIPTPAQILVGPMQFACSICNKTFNRYNNMQMHMWGHGSEFRKGPDSLKGTQPAAMLRLPCYCCANGCKNNINHPRAKPLKDFRTLQTHYKRKHGTKPFICRKCSKAFAVKGDWRTHEKNCGKFWYCTCGSDFKHKRSLKDHVRSFGKGHSPNPSLEGFEDEKECSNTGSDDDEVAHA* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3842 314 Gene3D Classic Zinc Finger 150 173 - -
Tpr7g3842 314 MobiDBLite consensus disorder prediction 281 314 - -
Tpr7g3842 314 SUPERFAMILY beta-beta-alpha zinc fingers 129 174 IPR036236 -
Tpr7g3842 314 ProSiteProfiles Zinc finger C2H2 type domain profile. 151 178 IPR013087 -
Tpr7g3842 314 Pfam C2H2-type zinc finger 151 170 - -
Tpr7g3842 314 Gene3D Classic Zinc Finger 194 284 - -
Tpr7g3842 314 SUPERFAMILY beta-beta-alpha zinc fingers 221 255 IPR036236 -
Tpr7g3842 314 MobiDBLite consensus disorder prediction 291 314 - -
Tpr7g3842 314 SMART c2h2final6 151 173 IPR013087 -
Tpr7g3842 314 SMART c2h2final6 235 255 IPR013087 -
Tpr7g3842 314 PANTHER ZINC FINGER PROTEIN WIP3-LIKE 1 310 - -
Tpr7g3842 314 ProSitePatterns Zinc finger C2H2 type domain signature. 153 173 IPR013087 -
Tpr7g3842 314 PANTHER ZINC FINGER PROTEIN WIP2 1 310 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3842 Tpr-Chr7 47682735 47686295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3842 8 304 C2H2 Transcription Factor Family AT1G08290 57.270 1.02e-121 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr7g3842 zf-C2H2_6 0.0001 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3842 - - gmx:100819306 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3842 7 47682735 47686295 Tpr7g3842 7 47682735 47686295 ECH
Tpr7g3842 7 47682735 47686295 Tpr4g1519 4 14949169 14952787 PCT