Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3841 ATGGCGGAAGAACACAGATGCCAAACACCGCAATTATGCGTCAACAATTGCGGTTTCTTTGGAAGCGCCACCACGGAGAATCTATGTTCAAGATGCTATCGTGATTTACAGCTTAAGGAACAACAAGCTTCATCTGCAAAGCTTGTTCTCAATCAATCAATCGTAGCGCCGCCGAAGAATTCGCCGGCGGTGGCGGTGGTTGCTGAACTGTCTTCTTCGTCTTCGGATCCTGTTGCGCTGCCTAGCGTTGTGGCGGTGGAGGAGAAGGCCGAGGAGAAACCGTTGAAACAGAATCGGTGTATGACGTGTAGGAAGCGCGTGGGGCTCACGGGGTTTAAGTGCAAGTGTGGGATGATGTTATGTGGGACCCACCGTTATCCTGAGCAGCATGATTGTGAGTTTGATTTCAAAGGGTTGGGAAAAGAGCAGATCAAGAAGGCGAATCCTGTGGTGAAAGGGGAAAAGCTTGAGAAGATTTGA 480 0.4979 MAEEHRCQTPQLCVNNCGFFGSATTENLCSRCYRDLQLKEQQASSAKLVLNQSIVAPPKNSPAVAVVAELSSSSSDPVALPSVVAVEEKAEEKPLKQNRCMTCRKRVGLTGFKCKCGMMLCGTHRYPEQHDCEFDFKGLGKEQIKKANPVVKGEKLEKI* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3841 159 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 159 - -
Tpr7g3841 159 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Tpr7g3841 159 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 56 - -
Tpr7g3841 159 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Tpr7g3841 159 SUPERFAMILY AN1-like Zinc finger 85 154 IPR035896 -
Tpr7g3841 159 Gene3D - 1 58 - -
Tpr7g3841 159 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Tpr7g3841 159 Pfam AN1-like Zinc finger 100 136 IPR000058 GO:0008270
Tpr7g3841 159 Gene3D - 71 155 IPR035896 -
Tpr7g3841 159 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 159 - -
Tpr7g3841 159 SMART AN1_Zf_4 100 137 IPR000058 GO:0008270
Tpr7g3841 159 ProSiteProfiles Zinc finger AN1-type profile. 94 140 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3841 Tpr-Chr7 47676646 47677688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3841 1 159 C2H2 Transcription Factor Family AT3G52800 49.412 1.73e-46 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3841 - - gmx:106795660 224.942