Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3831 ATGAAGGTTATCGCTGCTTACTTGTTGGCCGTTTTGGGAGGCAACGCATCCCCTTCAGCTGCTGATCTTAAACAAATTCTTGGATCAGTTGGAGTTGATGCTGAGGATAACAACATTGAGTTGCTCCTAAGTGAAGTTAAGGGCAAAGACTTCGCTGAGCTTATTGCTAGCGGAAGAGAAAAGTTGGCTTCAGTTCCTTCTGGTGGTGGTGCTGTTGCAGTGGCTGCTGCATCAGGAGGAGGTGCTGCAGCTGCTGCACCTGCTGCCGAAGCTAAGGAGGAGAAGAAGGTTGAAGAAAAAGAAGAATCCGATGATGATATGGGATTCAGCTTATTTGATTAA 342 0.4678 MKVIAAYLLAVLGGNASPSAADLKQILGSVGVDAEDNNIELLLSEVKGKDFAELIASGREKLASVPSGGGAVAVAAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3831 113 MobiDBLite consensus disorder prediction 89 103 - -
Tpr7g3831 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
Tpr7g3831 113 Pfam 60s Acidic ribosomal protein 17 112 - -
Tpr7g3831 113 Hamap 50S ribosomal protein L12 [rpl12]. 2 113 IPR027534 GO:0003735|GO:0005840|GO:0006414
Tpr7g3831 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 1 113 - -
Tpr7g3831 113 CDD Ribosomal_P2 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
Tpr7g3831 113 Gene3D - 1 59 IPR038716 -
Tpr7g3831 113 MobiDBLite consensus disorder prediction 85 113 - -
Tpr7g3831 113 Coils Coil 112 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3831 Tpr-Chr7 47542835 47544269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3831 1 70 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 78.571 1.91e-33 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3831 K02943 - cit:102611784 126.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3831 7 47542835 47544269 Tpr7g3831 7 47542835 47544269 ECH