Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3818 ATGAACTTGGAGAATGAATCTACTACTAATTCTCATGCAAACACAAAAGCAAATCCATACACTCACAATCACAAGAAAAAAACAGGAAGAAAGAAATTCAAGCAAACAAGGCACCCAATTTATAGAGGAATTCGTCAAAGAAATGGAAAAAAATGGGTGTCTGAAATTCGTGAACCAAACAAGAAAAAATCAAGAATATGGCTTGGAACTTACGCTACACCTGAAATGGCAGCTATCGCACATGATATAGCTGTCCTAGCATTTAAGGGCACTTCAGCAATATTCAATTTTCCTAATTCTATTTCTCTTCTTCCAGTTTTGAAATCAACTTCAGCTAAAGATATAAGAGAAGCTGCAAAGACTTTTACAAACACTAGAGATGAGACTAAGTCTTGTTTGGTGGAATGTAAGAGCCAAGAAAGTGTTTTTAAGGGTGATAATATTGAGATTATGAATAATGATATTGATGAGTCTAAAACAATGTTTTTTGATGAGGAGGTTTTGTTTAATATGCCTTGTTTTTTAGATAATATGGCTGAGGGTTTGCTTATTACACCACCCTCTATGAAGAGTGCATTGGATTGGGACAATCTTGATTGTGAAATGGATTTGACATTGTGGGCAGATTGA 630 0.3476 MNLENESTTNSHANTKANPYTHNHKKKTGRKKFKQTRHPIYRGIRQRNGKKWVSEIREPNKKKSRIWLGTYATPEMAAIAHDIAVLAFKGTSAIFNFPNSISLLPVLKSTSAKDIREAAKTFTNTRDETKSCLVECKSQESVFKGDNIEIMNNDIDESKTMFFDEEVLFNMPCFLDNMAEGLLITPPSMKSALDWDNLDCEMDLTLWAD* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3818 209 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 7 208 - -
Tpr7g3818 209 MobiDBLite consensus disorder prediction 1 35 - -
Tpr7g3818 209 Gene3D AP2/ERF domain 40 100 IPR036955 GO:0003700|GO:0006355
Tpr7g3818 209 SUPERFAMILY DNA-binding domain 40 100 IPR016177 GO:0003677
Tpr7g3818 209 CDD AP2 39 100 IPR001471 GO:0003700|GO:0006355
Tpr7g3818 209 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 7 208 IPR045277 GO:0003700
Tpr7g3818 209 ProSiteProfiles AP2/ERF domain profile. 40 98 IPR001471 GO:0003700|GO:0006355
Tpr7g3818 209 MobiDBLite consensus disorder prediction 19 35 - -
Tpr7g3818 209 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Tpr7g3818 209 PRINTS Ethylene responsive element binding protein signature 64 80 IPR001471 GO:0003700|GO:0006355
Tpr7g3818 209 MobiDBLite consensus disorder prediction 1 18 - -
Tpr7g3818 209 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Tpr7g3818 209 SMART rav1_2 40 104 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3818 Tpr-Chr7 47293729 47294358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3818 25 208 AP2-EREBP Transcription Factor Family AT4G25490 49.206 1.14e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Tpr7g3818 AP2 1.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3818 - - gmx:100803317 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3818 7 47293729 47294358 Tpr7g3818 7 47293729 47294358 ECH