Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3808 ATGGAGTTTTGGGGTGCTGAAGTTAAGGTTGGAGAAACCCTTAAGATTGACCCATTGGAATATGATGCTTGCATTCATCTATCACAGGCTGCATTAGGTGAATCTAAGAAAGACAAAGCAAATGAATCTGTGGTTCTTTCTGTCAAAGTTGGTGAACAGAAGCTAGTTTTGGGAACCCTTCTTAAGGACAAAATCCCTCAGATATCTCTTGAATTGGTTTTGGACAAGGAGTTTGAGCTTTCTCATAATTCCAAAACTACTAGTGTCCATTTCTGTGGATACAGAGCCCTTTACCCTGAAAATGATGAAGATAGCGAGGAAGATGATTTTGCTGATAGTGATGAGGAAGAGATCCCATTGGCTATTGCAGAGACAAAAGCAGAGGACAAGAAGGTTGCTGAACCTAAAAAAGCTGATGTCAAGAGTACTCATCCTGCCAAGAATGCTGCACCTGCTAAACCTGCAACTGCTAAACCTGAACCTAAGAAACCTGCACCTGCGAAACCAACTAAACAAGTTAAGGTTGTTGATCCTAAAGAAGATTCTGAAGATGACGATGACACTGATGAAGATGATGAAATTGGAAGCTCTGATGATGATGAGATGGAGGATGCTGACAGTGATGAAGTAGATGAGGATGACAGCGACGAAGAGGATGAGGAAGAGACTCCTGTGAAAAAGGTGGAGCAGGGAAAGAAGAGGGCCAATGAATCTGCTTCTAAAACTCCAGTTCCTCCCAAGAAATCAAAAAATGCCACTCCTGAAAAGACTGATGGTAAGAAAGCTGTACATACAGCAACTCCTCACCCTAAGAAGGGAGGAAAGACCCCAACCACAGATGCCAAAAGCCCCAAATCTGGAGGACAACTATCCTGTGGTAGCTGCAGCAAGACATTCAACTCTGAAACTGGGCTGCAACAACACAGCAAAGCCAAGCATGGTGCTCAGTAA 951 0.4332 MEFWGAEVKVGETLKIDPLEYDACIHLSQAALGESKKDKANESVVLSVKVGEQKLVLGTLLKDKIPQISLELVLDKEFELSHNSKTTSVHFCGYRALYPENDEDSEEDDFADSDEEEIPLAIAETKAEDKKVAEPKKADVKSTHPAKNAAPAKPATAKPEPKKPAPAKPTKQVKVVDPKEDSEDDDDTDEDDEIGSSDDDEMEDADSDEVDEDDSDEEDEEETPVKKVEQGKKRANESASKTPVPPKKSKNATPEKTDGKKAVHTATPHPKKGGKTPTTDAKSPKSGGQLSCGSCSKTFNSETGLQQHSKAKHGAQ* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3808 316 ProSitePatterns Zinc finger C2H2 type domain signature. 292 313 IPR013087 -
Tpr7g3808 316 MobiDBLite consensus disorder prediction 123 143 - -
Tpr7g3808 316 MobiDBLite consensus disorder prediction 123 292 - -
Tpr7g3808 316 MobiDBLite consensus disorder prediction 180 223 - -
Tpr7g3808 316 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 1 312 - -
Tpr7g3808 316 Pfam Nucleoplasmin-like domain 3 94 IPR041232 -
Tpr7g3808 316 ProSiteProfiles Zinc finger C2H2 type domain profile. 290 316 IPR013087 -
Tpr7g3808 316 Gene3D Nucleoplasmin core domain 1 99 - -
Tpr7g3808 316 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 1 312 - -
Tpr7g3808 316 MobiDBLite consensus disorder prediction 251 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3808 Tpr-Chr7 47163619 47167090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3808 1 315 C2H2 Transcription Factor Family AT5G03740 35.072 5.23e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr7g3808 NPL 1e-12 CL0055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3808 - - lang:109358867 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3808 7 47163619 47167090 Tpr7g3808 7 47163619 47167090 ECH
Tpr7g3808 7 47163619 47167090 Tpr4g1595 4 15975529 15979820 PCT