Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3797 ATGGCTTTAACTTTAACTTCAACTTCTCCACACTTTCGTTTTCAACCTTTCCTCACACGCACAAACTACGCCTTCTTCTCCGACCTTACCGAACAAGTTCACGATTCTCTCACTCTTCTTCGCCGGAGTAAGATCTCTGTTAATTCACCGCCAGCGCTGAAGCCGGTGAAATGCAGTAGATCCACAGAGGAGAAGCAGTGGAATGACGGCGAAACCGTTGCATCAGATTCCGATGAAGCGGTGGATGATTCAAATGGTCAATCTCCGAGCAGAACTTCTTCAATTGAGCCTCAGAAGATTGCTACTACCTCTTCCGGCGATTCACTTTCTCTCGGAATTCGAGAACCTGTTTATGAAGTAGTAGAAGTGAAATCAGATGGAACAGTATCCACTAGAAAGATCAACAGGAAACAGTTATTGAAGTCAAGTGGTCTTCGTCCGCGGGATGTCCGAAGTGTGGATCCATCATTGTTTTTGACAAATTCAATGCCCTCTTTGTTGGTCCGTGAGTATGCTATACTTCTAAACCTGGGTTCACTACGAGCAATAGCAATGAAAGATTGTGTACTTATATTTGACTATAATCGTAAAGGAGGGCAAGCTTTTCTAGAGTCATTGCTGCCTCGGTTGAACCCCAAGAACAACAATGGAGGACCATCGATGCCATTTGAAATCGAGGTTGTCGAAGCAGCATTACTTTCAAGAATACAACGTTTGGAGCGGAGACTGATGGACTTAGAACCTCGTGTTCAAGCTCTTCTGGAGGCCTTGCCAAATCGGATAACTGGGGACATATTGGAGCAACTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGCTCGAGGGCAGGAGCTCTCAGACAGATGCTGCTAGACCTTCTGGAGGACCCAAATGAAATACGGAGGATATGTATTATGGGAAGAAATTGTACACTTAATAAAGGAAACAATAACGTGGAATGCTCAGTTCCCTTAGAAAAGCAGGTTGCTGATGAAGAGGCGGAGGAAATTGAGATGCTTCTGGAAAATTATCTCCAAAGATCTGAATCTTGTCATGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATATCTGTCAGCTTAAGCTCAAGAAGACTTGAAGTTAGCAGGTTTGAACTGCTTCTCCAGGTTGGAACATTCTGTGTGGCAGTTGGTGCCCTTGTAGCAGGTATATTTGGCATGAACCTGAGGTCCTATCTTGAGGAACATGTGTTTGCATTTTGGCTGACTACATCTGGGATTATTATTGGTAGCATTGTTGTGTTTTTTCTTATGTATAACTACCTCAGAGCAAGGAAAATATTTTGA 1344 0.433 MALTLTSTSPHFRFQPFLTRTNYAFFSDLTEQVHDSLTLLRRSKISVNSPPALKPVKCSRSTEEKQWNDGETVASDSDEAVDDSNGQSPSRTSSIEPQKIATTSSGDSLSLGIREPVYEVVEVKSDGTVSTRKINRKQLLKSSGLRPRDVRSVDPSLFLTNSMPSLLVREYAILLNLGSLRAIAMKDCVLIFDYNRKGGQAFLESLLPRLNPKNNNGGPSMPFEIEVVEAALLSRIQRLERRLMDLEPRVQALLEALPNRITGDILEQLRISKQTLVELGSRAGALRQMLLDLLEDPNEIRRICIMGRNCTLNKGNNNVECSVPLEKQVADEEAEEIEMLLENYLQRSESCHGQAERLLDSAREMEDSISVSLSSRRLEVSRFELLLQVGTFCVAVGALVAGIFGMNLRSYLEEHVFAFWLTTSGIIIGSIVVFFLMYNYLRARKIF* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3797 447 Coils Coil 236 256 - -
Tpr7g3797 447 MobiDBLite consensus disorder prediction 51 107 - -
Tpr7g3797 447 Gene3D - 113 194 - -
Tpr7g3797 447 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 52 446 - -
Tpr7g3797 447 Coils Coil 327 347 - -
Tpr7g3797 447 Gene3D Magnesium transport protein CorA, transmembrane region 195 378 - -
Tpr7g3797 447 MobiDBLite consensus disorder prediction 79 107 - -
Tpr7g3797 447 CDD Mrs2_Mfm1p-like 120 446 IPR039204 -
Tpr7g3797 447 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 52 446 IPR039204 -
Tpr7g3797 447 MobiDBLite consensus disorder prediction 58 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3797 Tpr-Chr7 47027310 47034683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3797 111 447 MRS2 Gene Family AT5G22830 81.899 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3797 K16075 - gmx:100808371 673.7