Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3778 ATGGACCCATGGCTCGACGATCTCACCGACGACCTTCAAAGCCTAAGCTTCGCCTCCACAACCACCACCAACGCCGACATCAAACGAAGCACAAGCTTCGGTTCCACAACAACCGCCTCAACCTCCGCTCATCTCTCAAATCGATCCCTAAATCCGCCAATCACCAAACATCACGCTCCTTTATCCGACCCTCGCTGGTCCGCCATTCACCGGATCCGATCAGAATCACCTTCTCGTCACATCCTTCCGTCTGACCTTCGATTCTCCCGCCGTCTCGGTTCCGGTGATATTAGTTCTGTTTATCTTGCTGAACTTAATGACGACGGGAAAATTCCGGCGATGTTCGCGGCGAAAGTGATGGATAAGAAGGAGTTAGTTAGTAGAAGTAAAGAAGGAAGAGCGAAAACGGAGAGAGAAATACTTGAATCTCTTGATCATCCTTTTTTGCCTACTCTTTATGCTACTATTGATGCTGCGAAATGGCTTTGTCTTTTGACGGAGTTTTGTCCCGGCGGTGATCTTCATGTTCTCCGGCAACGGCAGCCAAATAAACGGTTCCCTGAATCCGCCGTCAGATTCTATGCATCAGAGGTGCTGATGGCACTTGAATACCTTCACATGTTGGGAATAGTATACCGTGATCTCAAGCCAGAGAATGTGTTAGTAAGATCAGATGGCCATATAATGCTCACAGACTTTGATCTCTCATTAAAATGTGATGCTGCTGATTCAACACCAGCTCAGATAATAATCTCAAGTCAAAACTCTCCACAAGTAGTCCCACAAAAATATCCCCACACTGGATCCTCTCAATTCGCCTCATCTTCATGCATAATACCTAATTGTATTGTCCCAGCAGTGTCTTGTTTCCAACCAAAACGCAAACGAAAGAAGAAACAAAACCAGTTTAATGGGCCTGAGTTTGTTGCTGAGCCTATTGATGTTAGATCCATGTCATTTGTTGGGACACATGAATACTTGGCTCCTGAGATAGTGTCTGGTGAAGGACATGGTAGTGCTGTGGATTGGTGGACCTTAGGAATATTTATATTTGAATTATTTTATGGTGTTACGCCTTTTAGAGGCTTGGATAATGAATTAACTCTAGCAAATATTGTGGCTCGAGCTTTGGAGTTCCCAAAGGAACCTACCGTGCCAGCCACGGTAAAAGATCTTATCTCACAGTTATTGGTTAAGGATCCAGCTAGGAGATTAGGATCAATAATGGGGGCTTCTACAATCAAACACCACTCGTTTTTTCAAGGTGTGAATTGGGCATTGTTAAGGTGTACAACTCCACCTTATGTTCCACCACCTTATAGTAAAGATAAAGATGATTTATCTGATGATAGTTGTCCACAAACTCCTATTGATTATTATTGA 1383 0.4396 MDPWLDDLTDDLQSLSFASTTTTNADIKRSTSFGSTTTASTSAHLSNRSLNPPITKHHAPLSDPRWSAIHRIRSESPSRHILPSDLRFSRRLGSGDISSVYLAELNDDGKIPAMFAAKVMDKKELVSRSKEGRAKTEREILESLDHPFLPTLYATIDAAKWLCLLTEFCPGGDLHVLRQRQPNKRFPESAVRFYASEVLMALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDAADSTPAQIIISSQNSPQVVPQKYPHTGSSQFASSSCIIPNCIVPAVSCFQPKRKRKKKQNQFNGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGLDNELTLANIVARALEFPKEPTVPATVKDLISQLLVKDPARRLGSIMGASTIKHHSFFQGVNWALLRCTTPPYVPPPYSKDKDDLSDDSCPQTPIDYY* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3778 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Tpr7g3778 460 Pfam Protein kinase domain 317 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3778 460 Pfam Protein kinase domain 89 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3778 460 PANTHER OS11G0150700 PROTEIN 1 460 - -
Tpr7g3778 460 MobiDBLite consensus disorder prediction 439 460 - -
Tpr7g3778 460 Gene3D Phosphorylase Kinase; domain 1 85 172 - -
Tpr7g3778 460 PANTHER FLIPPASE KINASE 1-RELATED 1 460 - -
Tpr7g3778 460 SUPERFAMILY Protein kinase-like (PK-like) 67 449 IPR011009 -
Tpr7g3778 460 CDD STKc_phototropin_like 84 430 - -
Tpr7g3778 460 MobiDBLite consensus disorder prediction 33 53 - -
Tpr7g3778 460 PIRSF ILK 293 406 - -
Tpr7g3778 460 PIRSF ILK 20 268 - -
Tpr7g3778 460 MobiDBLite consensus disorder prediction 33 58 - -
Tpr7g3778 460 SMART serkin_6 86 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3778 460 ProSiteProfiles Protein kinase domain profile. 86 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3778 460 Gene3D Transferase(Phosphotransferase) domain 1 173 260 - -
Tpr7g3778 460 Gene3D Transferase(Phosphotransferase) domain 1 316 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3778 Tpr-Chr7 46706875 46712946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3778 1 460 AGC Kinase Gene Family AT3G44610 64.619 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tpr7g3778 Pkinase 3.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3778 K08286 - gmx:100792738 708.753