Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3776 ATGAACTTGGAGAATGAATCTACTACTAATTCTCATGCAAACACAAAAGCAAATCCATACACTCACAAGAAAAAAACAGGAAGAAAGAAATTCAAGCAAACAAGGCACCCAATTTATAGAGGAATTCGTCAAAGAAATGGAAAAAAATGGGTGTCTGAAATTCGTGAACCAAACAAGAAAAAATCAAGAATATGGCTTGGAACTTACGCTACACCTGAAATGGCAGCTATCGCACATGATATAGCTGTCCTAGCATTTAAGGGCACTTCAGCAATATTCAATTTTCCTAATTCTATTTCTCTTCTTCCAGTTTTGAAATCAACTTCAGCTAAAGATATAAGAGAAGCTGCAAAGACTTTTACAAACACTAGAGATGAGACTAAGTCTTGTTTGGTGGAATGTAAGAGCCAAGAAAGTGTTTTTAAGGGTGATAATATTGAGATTATGAATAATGATATTGATGAGTCTAAAACAATGTTTTTTGATGAGGAGGTTTTGTTTAATATGCCTTGTTTTTTAAATAATATGGCTGAGGGTTTGCTTATTACACCACCCTCTATGAAGAGTGCATTGGATTGGGACAATGTTGATTGTGAAATGGATTTGACATTGTGGGCAGATTGA 624 0.3462 MNLENESTTNSHANTKANPYTHKKKTGRKKFKQTRHPIYRGIRQRNGKKWVSEIREPNKKKSRIWLGTYATPEMAAIAHDIAVLAFKGTSAIFNFPNSISLLPVLKSTSAKDIREAAKTFTNTRDETKSCLVECKSQESVFKGDNIEIMNNDIDESKTMFFDEEVLFNMPCFLNNMAEGLLITPPSMKSALDWDNVDCEMDLTLWAD* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3776 207 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 7 206 IPR045277 GO:0003700
Tpr7g3776 207 SMART rav1_2 38 102 IPR001471 GO:0003700|GO:0006355
Tpr7g3776 207 CDD AP2 37 98 IPR001471 GO:0003700|GO:0006355
Tpr7g3776 207 ProSiteProfiles AP2/ERF domain profile. 38 96 IPR001471 GO:0003700|GO:0006355
Tpr7g3776 207 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 7 206 - -
Tpr7g3776 207 Gene3D AP2/ERF domain 38 98 IPR036955 GO:0003700|GO:0006355
Tpr7g3776 207 MobiDBLite consensus disorder prediction 1 32 - -
Tpr7g3776 207 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Tpr7g3776 207 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Tpr7g3776 207 MobiDBLite consensus disorder prediction 1 17 - -
Tpr7g3776 207 SUPERFAMILY DNA-binding domain 38 98 IPR016177 GO:0003677
Tpr7g3776 207 Pfam AP2 domain 37 86 IPR001471 GO:0003700|GO:0006355
Tpr7g3776 207 MobiDBLite consensus disorder prediction 18 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3776 Tpr-Chr7 46681895 46682518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3776 23 206 AP2-EREBP Transcription Factor Family AT4G25490 48.677 4.65e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr7g3776 AP2 1.4e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3776 - - gmx:100803317 240.35