Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3773 ATGAGATTGGAGAAATGTTGGTTTTGTTCTTCGACTGTATATCCCGGACATGGAATTCAGTTTGTTCGTAACGATGCAAAGATTTTTCGGTTTTGTAGATCAAAATGCCACAAGAACTTCAAAATGAAGAGAAATCCTCGGAAAGTAAAATGGACCAAGGCATATAGGCGAGTTCATGGAAAGGATATGACACAGGATTCAACCTTTGAGTTTGAGAGAAAGCGAAACAGGCCTGAGAGATACGACAGGAATCTTGCTGAGAATGTACTCAAGGCAATTCCTAAGATTGATAAGATCAGAGTCAGTAGGGAGGAGAGCCACCATAAGAACAGGATGAAAGGCAACAAGGATAAAGCACGGAGGGAAGCACAGAAGGAATTGAAGCAGGACATCGTTTTGATCACAGAACCTAACTCTACACCAGGCGATAAGATCACAGTCAATGTTACCCAACAACTGCCAGAAGAGAATCCTCTCATGGAAGAGTGA 489 0.4213 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREESHHKNRMKGNKDKARREAQKELKQDIVLITEPNSTPGDKITVNVTQQLPEENPLMEE* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3773 162 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Tpr7g3773 162 PANTHER 60S RIBOSOMAL PROTEIN L24 1 160 IPR000988 -
Tpr7g3773 162 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Tpr7g3773 162 SMART 4TRASH 6 44 IPR011017 -
Tpr7g3773 162 MobiDBLite consensus disorder prediction 101 162 - -
Tpr7g3773 162 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Tpr7g3773 162 MobiDBLite consensus disorder prediction 133 155 - -
Tpr7g3773 162 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
Tpr7g3773 162 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Tpr7g3773 162 MobiDBLite consensus disorder prediction 101 129 - -
Tpr7g3773 162 PANTHER BNAA04G10330D PROTEIN 1 160 - -
Tpr7g3773 162 Coils Coil 109 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3773 Tpr-Chr7 46659296 46661411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3773 1 162 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 67.901 1.16e-78 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3773 K02896 - gmx:100306000 276.944