Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3766 ATGGAGTTTTGGGGTGCTGAAGTTAAGGTTGGAGAAACCCTTAAGATTGACCCATTGGAATATGATGCTTGCATTCATCTATCACAGGCTGCATTAGGTGAATCTAAGAAAGACAAAGCAAATGAATCTGTGGTTCTTTCTGTCAAAGTTGGTGAACAGAAGCTAGTTGTGGGAACCCTTCTTAAGGACAAAATCCCTCAGATATCTCTTGAATTGGTTTTGGACAAGGAGTTTGAGCTTTCTCATAATTCCAAAACTACTAGTGTCCATTTCTGTGGATACAGAGCCCTTTACCCTGAAAATGATGAAGATAGCGAGGAAGATGATTTTGCTGATAGTGATGAGGAAGAGATCCCATTGGCTATTGCAGAGACAAAAGCAGAGGACAAGAAGGTTGCTGAACCTAAAAAAGCTGATGTCAAGAGTACTCATCCTGCCAAGAATGCTGCACCTGCTAAACCTGAACCTAAGAAATCTGCACCTGCGAAACCAACTAAACAAGTTAAGGTTGTTGATCCTAAAGAAGATTCTGAAGATGACGATGACACTGATGAAGATGATGAAATTGGAAGCTCTGATGATGATGAGATGGAGGATGCTGACAGTGATGAAGTAGATGAGGATGACAGCGACGAAGAGGATGAGGAAGAGACTCCTGTGAAAAAGGTGGAGCAGGGAAAGAAGAGGGCCAATGAATCTGCTTCTAAAACTCCAGTTCCTCCCAAGAAATCAAAAAATGCCACTCCTGAAAAGACTGATGGTAAGAAAGCTGTACATACAGCAACTCCTCACCCTAAGAAGGGAGGAAAGACCCCCACCACAGATGCCAAAAGCCCCAAATCTGGAGGACAACTATCCTGTGGTAGCTGCAGCAAGACATTCAACTCTGAAACTGGGCTGCAACAACACAGCAAAGCCAAGCATGGTGCTCAGTAA 936 0.4338 MEFWGAEVKVGETLKIDPLEYDACIHLSQAALGESKKDKANESVVLSVKVGEQKLVVGTLLKDKIPQISLELVLDKEFELSHNSKTTSVHFCGYRALYPENDEDSEEDDFADSDEEEIPLAIAETKAEDKKVAEPKKADVKSTHPAKNAAPAKPEPKKSAPAKPTKQVKVVDPKEDSEDDDDTDEDDEIGSSDDDEMEDADSDEVDEDDSDEEDEEETPVKKVEQGKKRANESASKTPVPPKKSKNATPEKTDGKKAVHTATPHPKKGGKTPTTDAKSPKSGGQLSCGSCSKTFNSETGLQQHSKAKHGAQ* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3766 311 Gene3D Nucleoplasmin core domain 1 99 - -
Tpr7g3766 311 MobiDBLite consensus disorder prediction 123 287 - -
Tpr7g3766 311 MobiDBLite consensus disorder prediction 123 143 - -
Tpr7g3766 311 ProSitePatterns Zinc finger C2H2 type domain signature. 287 308 IPR013087 -
Tpr7g3766 311 MobiDBLite consensus disorder prediction 246 260 - -
Tpr7g3766 311 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 1 307 - -
Tpr7g3766 311 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 1 307 - -
Tpr7g3766 311 Pfam Nucleoplasmin-like domain 3 94 IPR041232 -
Tpr7g3766 311 MobiDBLite consensus disorder prediction 175 218 - -
Tpr7g3766 311 ProSiteProfiles Zinc finger C2H2 type domain profile. 285 311 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3766 Tpr-Chr7 46558101 46561553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3766 1 310 C2H2 Transcription Factor Family AT5G03740 36.471 1.50e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr7g3766 NPL 1.2e-12 CL0055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3766 - - lang:109358867 310.842