Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3738 ATGAACTCAAATATGGATGACCACCAAAACTCACTAGTGTACACCAATAATTTTGAGCTTCACGACTTCATTCACGATCCAAACTTTGATCAATCTATCGATTTAATTCATGGTGAGAATGAAGATGCAATATGTAACTTTGGTTCTAACCTTATCAATGATTGTTTTGTTGATAATAATCATCATGAGCTTCTTTCAATTCCTCCAAACCCATTAATATTTGATCATAACATCAACAACTATGGTAATATTGTGAATGTGCATGATCCAAGCTCTAGCACAATTGGATCCTTCTCTTGTTATGATCGGGAGGTTAAGGGAGAAGGAGTAAATGACGGAGGCCCTTCTTCGGCAACAACAATTACGACGACCGCGATTGATGGTGCCAAACATAGGGCTAAAACCGACAAGTCTAATATACTCATTTGTGAGAAGAGAAGGAGAGATCGAATGAAGGATAAGCTTTATGAGTTGCGTTCTTTGGTTCCAAACATTACAAAGATGGATAAGGCCTCTATAATTGGAGATGCAGTATCATATGTGCATGACCTTCAAGCACAAGCTTGGAAGTTGAAGGATGAGGTTTCAGGACTTGAAGCATCCTTATTGGTATCTGAAAATCATCAAGGATCAATTAACAACACCATTAATATTCAAAGTTATCCTACTTTCAAGAAAATTATTCAGGTGGACATGTTCCAAGTAGAGGAAAGAGGATATTATGCAAAAATATTGTGCAATAGAGGAGAAGGAGTAGCTTCTTCATTGTACAAGGCTATTGAATCTCTTGCAAATTTCAATATTCAAAATTCAAATTTGGCTACAGTTTTTGACAATTTTCTATTCACATTTACATTGAATGTAAATGGTTCTGAACCAGAAATGAACCTTCAAAATTTGAAGCTATTGGTGGTTGGTGCACTTTTGAACCAAGGCTTTGAATTCATGCCATCCTTTTGA 960 0.3615 MNSNMDDHQNSLVYTNNFELHDFIHDPNFDQSIDLIHGENEDAICNFGSNLINDCFVDNNHHELLSIPPNPLIFDHNINNYGNIVNVHDPSSSTIGSFSCYDREVKGEGVNDGGPSSATTITTTAIDGAKHRAKTDKSNILICEKRRRDRMKDKLYELRSLVPNITKMDKASIIGDAVSYVHDLQAQAWKLKDEVSGLEASLLVSENHQGSINNTINIQSYPTFKKIIQVDMFQVEERGYYAKILCNRGEGVASSLYKAIESLANFNIQNSNLATVFDNFLFTFTLNVNGSEPEMNLQNLKLLVVGALLNQGFEFMPSF* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3738 319 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 14 316 - -
Tpr7g3738 319 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 137 202 IPR036638 GO:0046983
Tpr7g3738 319 SMART finulus 141 190 IPR011598 GO:0046983
Tpr7g3738 319 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 135 184 IPR011598 GO:0046983
Tpr7g3738 319 Gene3D - 125 186 IPR036638 GO:0046983
Tpr7g3738 319 Pfam Helix-loop-helix DNA-binding domain 142 185 IPR011598 GO:0046983
Tpr7g3738 319 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 14 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3738 Tpr-Chr7 46266339 46271192 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3738 5 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 45.758 1.23e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr7g3738 HLH 1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3738 - - gmx:100805451 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3738 7 46266339 46271192 Tpr7g3738 7 46266339 46271192 ECH