Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3727 ATGGCGGAGACAATTCGCATATCTAGCGAAGACATCAAGATTGAAGGTAGTGGCGTTATTGGAGCAAAACCCTCTTTGTTAGGTCGAAGAAAACGTTCGTTCTTTGACTTAAACGAAGAAGCTGTGGATGATATTGGAGATGATGATGAGATACTAATAAGTGATGGCCTTTGTGGTGAGATTAGTAACAACAATGAGATATCATCACAATCACAAGAAGGGAATTTAAGTAGCAATAATAATTCAAGTGAAGAGAAAGGGCGTGGAAGTTCGGTAAGACAATATGTGAGGTCGAAAATGCCTAGGCTTCGATGGACTCCCGATCTTCATTTATCTTTTGTGCATGCTATTGAGAGGCTTGGAGGGCAAGAAAGAGCAACACCCAAGCTGGTTCTCCAGTTGATGAATGTAAGAGGACTTAGTATTGCACATGTGAAGAGTCATTTGCAGATGTATCGGAGTAAAAAGCTTGATGAGTCTGGCCAAGTTTTATCCCAAAAGAATAGGGCAATGCAAGGAAGGAATCATCACATTTTGGATATGTATGGAAGATTTAATGTCCAAGGACAATTTGGTGTTAATAACAACTATTTGCAACCATCGTCTCAACTAATGAAACAACCATATAATGAAATCAAAACTCATGCAACTTCAAGGTTTCATGAGAATGGGGTTTTCAATAATAATCACGTGATCTTAAGATCAAGTTCAGTGTGGGACAAAGATTTATATAAGACAAGTTCACATATATTTGATGTAAAGGATGCAATAACAAGAAATAATATTGGACCTATTAATTCTAGCCAAATATTTCAATTGCTACCTGAAGAAAAGAAGTGGCCTCCACAAGGAAGTGAAAATCACATAAGCTTGTCTCGTGATGAACAACATTTTCCATGGAGCTCCTATTCTAGTCCTATATTCACTAAGGTACATGATAAAAAAGATGGAATGCAAGAATTCATACACCAAACTCAAGTATTGAAGCAAGGTCATGTCACAGTGCAATTAAAAAGGTTGAATGAGAAGAAAGAGAACTCACCAAGTTTCTTAGAACTAAAGCTAAGTCGAGACTCAGAAATCAATGTTAAGGATCAAACGAATATAGATCTAAAAGGCGAACAAGAAGCGCACACAATTCTCTCTCTTTCGTTGTTCTCTTCCTCGTCCTCGAATTCAAGGTGA 1185 0.3755 MAETIRISSEDIKIEGSGVIGAKPSLLGRRKRSFFDLNEEAVDDIGDDDEILISDGLCGEISNNNEISSQSQEGNLSSNNNSSEEKGRGSSVRQYVRSKMPRLRWTPDLHLSFVHAIERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQKNRAMQGRNHHILDMYGRFNVQGQFGVNNNYLQPSSQLMKQPYNEIKTHATSRFHENGVFNNNHVILRSSSVWDKDLYKTSSHIFDVKDAITRNNIGPINSSQIFQLLPEEKKWPPQGSENHISLSRDEQHFPWSSYSSPIFTKVHDKKDGMQEFIHQTQVLKQGHVTVQLKRLNEKKENSPSFLELKLSRDSEINVKDQTNIDLKGEQEAHTILSLSLFSSSSSNSR* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3727 394 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 101 156 IPR006447 GO:0003677
Tpr7g3727 394 MobiDBLite consensus disorder prediction 68 89 - -
Tpr7g3727 394 Pfam Myb-like DNA-binding domain 103 153 IPR001005 -
Tpr7g3727 394 SUPERFAMILY Homeodomain-like 99 155 IPR009057 -
Tpr7g3727 394 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 63 391 IPR044848 GO:0003700
Tpr7g3727 394 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 157 IPR017930 -
Tpr7g3727 394 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 63 391 - -
Tpr7g3727 394 MobiDBLite consensus disorder prediction 68 93 - -
Tpr7g3727 394 Gene3D - 100 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3727 Tpr-Chr7 46137728 46142385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3727 92 181 G2-like Transcription Factor Family AT2G42660 66.667 1.53e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tpr7g3727 Myb_DNA-binding 3.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3727 - - mtr:MTR_2g084230 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3727 7 46137728 46142385 Tpr7g3727 7 46137728 46142385 ECH