Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3707 ATGAACTCAAATATGGATGACCACCAAAACTCACTAGTGTACACCAATAATTTTGAGCTTCACGACTTCATTCACGATCCAAACTTTGATCAATCTATCGATTTAATTCATGGTGAGAATGAAGATGCAATATGTAACTTTGGTTCTAACCTTATCAATGATTGTTTTGTTGATAATAATCATCATGAGCTTCTTTCAATTCCTCCAAACCCATTAATATTTGATCATAACATCAACAACTATGGTAATATTGTCCATGATCCAAGCTCTAGCACAATTGGATCCTTCTCTTGTTATGATCGGGAGGTTAAGGGAGAAGGAGAAAATGACGGAGGCCCTTCTTCGGCAACAACAATTACGACAACCGCGATTGATGGTGCCAAACATAGGGCTAAAACCGACAAGTCTAATATACTCATTTGTGAGAAGAGAAGGAGAGATCGAATGAAGGATAAGCTTTATGAGTTGCGTTCTTTGGTTCCAAACATTACAAAGATGGATAAGGCCTCTATAATTGGAGATGCAGTATCATATGTGCATGACCTTCAAGCACAAGCTTGGAAGTTGAAGGATGAGGTTTCAGGACTTGAAGCATCCTTATTGGTATCTGAAAATCATCAAGGATCAATTAACAACACCATTAATATTCAAAGTTATCCTACTTTCAAGAAAATTATTCAGGTGGACATGTTCCAAGTAGAGGAAAGAGGATATTATGCAAAAATATTGTGCAATAGAGGAGAAGGAGTAGCTGCTTCATTGTACAAGGCTATTGAATCTCTTGCAAATTTCAATATTCAAAATTCAAATTTGGCTACAGTTTTTGACAATTTTCTATTCACATTTACATTGAATGTAAGTGGTTCTGAACCAGAAATGAACCTTCAAAATTTGAAGCTATTGGTGGTTGGTGCACTTTTGAACCAAGGCTTTGAATTCATGCCATCCTTTTGA 954 0.3627 MNSNMDDHQNSLVYTNNFELHDFIHDPNFDQSIDLIHGENEDAICNFGSNLINDCFVDNNHHELLSIPPNPLIFDHNINNYGNIVHDPSSSTIGSFSCYDREVKGEGENDGGPSSATTITTTAIDGAKHRAKTDKSNILICEKRRRDRMKDKLYELRSLVPNITKMDKASIIGDAVSYVHDLQAQAWKLKDEVSGLEASLLVSENHQGSINNTINIQSYPTFKKIIQVDMFQVEERGYYAKILCNRGEGVAASLYKAIESLANFNIQNSNLATVFDNFLFTFTLNVSGSEPEMNLQNLKLLVVGALLNQGFEFMPSF* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3707 317 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 133 182 IPR011598 GO:0046983
Tpr7g3707 317 Pfam Helix-loop-helix DNA-binding domain 140 183 IPR011598 GO:0046983
Tpr7g3707 317 SMART finulus 139 188 IPR011598 GO:0046983
Tpr7g3707 317 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 14 314 - -
Tpr7g3707 317 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 14 314 - -
Tpr7g3707 317 Gene3D - 123 184 IPR036638 GO:0046983
Tpr7g3707 317 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 135 200 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3707 Tpr-Chr7 45871492 45879062 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3707 5 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 46.341 4.95e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr7g3707 HLH 1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3707 - - gmx:100805451 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3707 7 45871492 45879062 Tpr4g1631 4 16654631 16656989 PCT