Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3683 ATGGATTCAAACTCAAAAATTTCAGACATATTGCTCTCATGGAGGTCTTTGCTCCCGCAACCATTTAGGGCTCTGTTGGGCCGTTTTTCATTTTCCAATTTGGGCCAGGGAGGTTCAGCTTCTTCCAGTCCTTCCATTGATTCCAACCGTGTTCATAATTGTAGATATGATGTGTTTATCAGTTTCAGAGGTGTTGATACCCGTAACACTTTTGTTGATCATCTTTATGCTCATCTAACAAGAAAGGGTATTTTCTCCTTCATGGATGATAAGAGGCTTGAGAAAGGGGAATCCCTTTCGCCACAGCTTCTGCAAGCAATTAAAAACTCTCGGATTTCTATTGTTGTTTTCTCTCAACGATATGCTGAGTCCACATGGTGTTTGGAAGAAATGACTACTATTGCTGAATGTCGTAAAGATTTGAAACAAATCGTTTTCCCTGTTTTTTATGATATCGATCCATCTCATGTACGAAAACAGACTGGGTTGTACCAGCATGCCTTTGATTTACACAGGAATAGATTCAATCATGATCCGAATAAGGTTGTGAGATGGACGAAAGCTTTGGTCGATTTAACTGAAGTAGTTGGTTGGGATGTTAGGAACAAACCAGAGTTTCGAGAGATTAAAGATATTGTTCAGGAAGTAATAAAAATATTGGGTCATAAATTCTCAGGGTTTGCTGATGAGCTTATTGGGATACAACCTCGAGTAGAAGAATTAGAAAGCCTGCTGAAATTAAACTCAACAGATGATGAATTCCGAGCTATAGGTATTTGGGGGATGGCTGGAATCGGAAAGACAACTCTTGCTTCCGTCTTGTATGATAGAGTCTCCTATCAGTTTGATGCAAGCTGTTTTATTGAGAACGTAAGCAAAATTTATAAAGAGGGTGGTGCTACTGCTGTAAACAAACAAATCCTTAGGCAAACCATGGATGAAAAAAACCTAGAGACATACAGCTCTTCTGAAATATCTGGAATCATACATAAAAGACTTCGCAACAGAAAGTTTCTTGTAGTTCTTGACAATGTTGATCTATTAGAGCAGGTGGAAGAGTTGGCTATAAATTCCGAGTTGCTTGGTAAAGGAAGTAGAATGATCATTACAACCAGGGATATGCATATTCTAAGAGTGTTTGGAGCACAGTTATCGGTATCTCACGATACATGTTTGTCGTACGATGTGTATGAGGTTCCACTATTGAACAACAATGATGCTCGCAAACTTTTCTATAGAAAAGCTTTCAGAAATGAGGATCCCACTAGCGGATGTGTGAAGTTAATTCCTGAGGTACTAAAATATGCTCAAGGTCTTCCATTAGCAGTTCGAGTAGTGGGTTCTTTCTTGTGTACTCGAAATGCTAACCAATGGAGAGATGCTTTGTATAGATTGAGGAATAATCCAGACAACAAAGTTATGGATGTGCTTCAGATAAGTTTTGACGGATTACATTCAGAGGAAAAAGAAATATTTCTGCATATTGCTTGTTTCTTTAAAGGGGAGAAGGAAGATTATGTGAAGCGTATTCTAGATGCTTGTGGGTTGCACCCTCACATTGGAATTCAAAGTTTGATTGAGAGGTCATTTATAAGTATTATAAATCAGGAAATCCTTATGCATGAAATGCTGCAAGAATTGGGGAAGAAAATTGTTCGGCAACAATTTCCTTTCCAACCAGGATCGTGGAGTAGATTGTGGCTTTATGAGGATTTCTACTCTGTCATGACTACAGTAACAGGAACAAACAATGTTAATGCCATAATTCTAGACCAAAAAGTGCATATCTCGGAACATCCTCGGTTGATGGCTGAAGGATTGTCAATAATGAGGGGACTTAAAATTCTTATAATGTATCATACAAATTTTTCAGGAAGTCTCAACTTCCTTTCTAACAGCTTGCAGTATCTTCTGTGGTATGGTTACCCTTTTGCTTCTTTGCCATTAAATTTTGAGCCTTATTATCTTGTTGAATTGAATATGCCTCGTAGCAGCATCCAACGACTATGGGATGGTCACAAGGATCTCCCTTGTTTGAAAAGGGTGGATTTAAGCAACTCCAAATATCTTGTGGAGACTCCTAGTTTTGCTGGATGCAGAATACTCGAGCGTCTAGATTTTACAGGATGCATGAACCTATCGTATGTCCATCCGTCTATTGGACTTCTTGAAAAACTTGCTTTCTTGAGTTTGGAAGGCTGCAGCAGTTTAGTCATGCTAGTTCTTGATGGTGACACTGCATCTAACTTGTATTCTCTCAAAGTTTTGCATCTCTCTGGCTGCACACAACTTGAAACCATATCTGGTTTTAACGGGGTCTCAAATCTTGAGTATCTTGATATTGATCAATGTTTGAGTTTATCAACAATTGATCATTCTATTGGTGATCTTAAACAACTTAAATTCTTGAGTTTAAGAGACTGCACAAATCTTGTCAGTATACCCGAAAGCATTAATTCTATGCCTTCTCTTGTAACTATAGATCTATGTGGGTGCTTAAAACTAGAGAATCTACCCTTGCTGGCAAACATGTCAATGTCTGAAGAAAGTAATGACGCCATATTTGCGTCTGTAGAAAACTTTGATCGCTGTTATGGTGAACTCATATCTTCTTACTATCTGAATTCTTTGATATTTTTGGACCTAAGCTTTTGCAATTTAAGTACAGTACCTGATGCTATTGGAGAGTTACGGCATTTAGAAAGGTTAAATCTTGAAGGAAACAACTTCGTTTCCTTACCGCCTTCAATGTGGAGGCTTTCTAGTCTAGCATATTTAAACTTGGCGCATTGCAGCAGGCTTCAATATTTGCCTGACCTCCAATTTTGTGCTACTTCATCTGGGGGCAAGTATTTCAAAATGATATCCGGATCTCATAATCATAGGTCAGGATTATATATTTTCAACTGTCCCCTCTTGGAGATTGCAGAACGTCATAACTTGGCACTTTCATCGATGATGAAATTAATTGAGAATCCTTGTCATTTCCGGTGTGGCCTTGACATTGTTGTTCCTGGATACACAGTTCCACGGTGGTTTGATCATCAATTTGCGGAAAATTCAAGTGTACGGATAACAGACTATATGACCGAGTTTGACAATTGGCTTGGCTTTGCCTTTTGTGTGGCATTTGTGGAAAACTGTCGTCCTGCAACTTCTAGTTCTTCACAGTATTCATTTTCATCACAGCTGCCATATCCTCTTTATCTTTCTTTTGAAAGTGAACAAATGGAAGAAACCTTCGATATGCCGCTTCGGTTAGACCTGAACAAGGCTGATGGTTTAAATACAGAACATCTCTGGCTAATCTATATCTCTAGACCCCATTGCCATTTTGTGGCAACAGGAGCAGCAGTCACATTTAAAGCACACCCAGATGTGGAGTTGAAAACTTGGGGATTTCGCATGATATTCGAGCATGATATCTCTAGTTCATTCGAGTTAGGGACAGATGAGGTTCATCAACAACAAGGCTATATTCACGTGGATCATGTACATGAGCGTAGCAGCAGTAAGAGGCCTGAAGTCCAGCTTCCTTATAATTGGTATGTTACTGAGGAAGAGGAAAAGTCTAAAATTCTGCTTCGTTATAATTGGCATGTTACTGAGGAAGAGGAAATCGAGAGTAGAGAAGTGAATGTGAAAGAAAGTCGTCTCTCGAATATGGGCCTTACCACGTAG 3681 0.3904 MDSNSKISDILLSWRSLLPQPFRALLGRFSFSNLGQGGSASSSPSIDSNRVHNCRYDVFISFRGVDTRNTFVDHLYAHLTRKGIFSFMDDKRLEKGESLSPQLLQAIKNSRISIVVFSQRYAESTWCLEEMTTIAECRKDLKQIVFPVFYDIDPSHVRKQTGLYQHAFDLHRNRFNHDPNKVVRWTKALVDLTEVVGWDVRNKPEFREIKDIVQEVIKILGHKFSGFADELIGIQPRVEELESLLKLNSTDDEFRAIGIWGMAGIGKTTLASVLYDRVSYQFDASCFIENVSKIYKEGGATAVNKQILRQTMDEKNLETYSSSEISGIIHKRLRNRKFLVVLDNVDLLEQVEELAINSELLGKGSRMIITTRDMHILRVFGAQLSVSHDTCLSYDVYEVPLLNNNDARKLFYRKAFRNEDPTSGCVKLIPEVLKYAQGLPLAVRVVGSFLCTRNANQWRDALYRLRNNPDNKVMDVLQISFDGLHSEEKEIFLHIACFFKGEKEDYVKRILDACGLHPHIGIQSLIERSFISIINQEILMHEMLQELGKKIVRQQFPFQPGSWSRLWLYEDFYSVMTTVTGTNNVNAIILDQKVHISEHPRLMAEGLSIMRGLKILIMYHTNFSGSLNFLSNSLQYLLWYGYPFASLPLNFEPYYLVELNMPRSSIQRLWDGHKDLPCLKRVDLSNSKYLVETPSFAGCRILERLDFTGCMNLSYVHPSIGLLEKLAFLSLEGCSSLVMLVLDGDTASNLYSLKVLHLSGCTQLETISGFNGVSNLEYLDIDQCLSLSTIDHSIGDLKQLKFLSLRDCTNLVSIPESINSMPSLVTIDLCGCLKLENLPLLANMSMSEESNDAIFASVENFDRCYGELISSYYLNSLIFLDLSFCNLSTVPDAIGELRHLERLNLEGNNFVSLPPSMWRLSSLAYLNLAHCSRLQYLPDLQFCATSSGGKYFKMISGSHNHRSGLYIFNCPLLEIAERHNLALSSMMKLIENPCHFRCGLDIVVPGYTVPRWFDHQFAENSSVRITDYMTEFDNWLGFAFCVAFVENCRPATSSSSQYSFSSQLPYPLYLSFESEQMEETFDMPLRLDLNKADGLNTEHLWLIYISRPHCHFVATGAAVTFKAHPDVELKTWGFRMIFEHDISSSFELGTDEVHQQQGYIHVDHVHERSSSKRPEVQLPYNWYVTEEEEKSKILLRYNWHVTEEEEIESREVNVKESRLSNMGLTT* 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3683 1226 SMART till_3 55 195 IPR000157 GO:0007165
Tpr7g3683 1226 Pfam TIR domain 56 218 IPR000157 GO:0007165
Tpr7g3683 1226 SUPERFAMILY L domain-like 607 993 - -
Tpr7g3683 1226 SUPERFAMILY "Winged helix" DNA-binding domain 471 575 IPR036390 -
Tpr7g3683 1226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 228 495 IPR027417 -
Tpr7g3683 1226 Gene3D Ribonuclease Inhibitor 574 744 IPR032675 -
Tpr7g3683 1226 Pfam NB-ARC domain 248 469 IPR002182 GO:0043531
Tpr7g3683 1226 ProSiteProfiles TIR domain profile. 54 220 IPR000157 GO:0007165
Tpr7g3683 1226 Gene3D - 227 385 IPR027417 -
Tpr7g3683 1226 Gene3D - 401 485 IPR042197 -
Tpr7g3683 1226 Gene3D - 53 225 IPR035897 -
Tpr7g3683 1226 SMART LRR_typ_2 897 920 IPR003591 -
Tpr7g3683 1226 SMART LRR_typ_2 874 895 IPR003591 -
Tpr7g3683 1226 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 774 840 - -
Tpr7g3683 1226 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 50 766 - -
Tpr7g3683 1226 Gene3D Ribonuclease Inhibitor 863 992 IPR032675 -
Tpr7g3683 1226 Gene3D Ribonuclease Inhibitor 745 854 IPR032675 -
Tpr7g3683 1226 SUPERFAMILY Toll/Interleukin receptor TIR domain 46 198 IPR035897 -
Tpr7g3683 1226 PRINTS Disease resistance protein signature 256 271 - -
Tpr7g3683 1226 PRINTS Disease resistance protein signature 332 346 - -
Tpr7g3683 1226 PRINTS Disease resistance protein signature 436 450 - -
Tpr7g3683 1226 PRINTS Disease resistance protein signature 748 764 - -
Tpr7g3683 1226 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 50 766 IPR044974 GO:0006952
Tpr7g3683 1226 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 774 840 IPR044974 GO:0006952
Tpr7g3683 1226 Pfam Leucine Rich Repeat 655 672 IPR011713 -
Tpr7g3683 1226 Pfam C-JID domain 1004 1142 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3683 Tpr-Chr7 45579983 45585753 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3683 230 838 WRKY Transcription Factor Family AT5G45050 31.944 7.01e-84 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3683 - - mtr:MTR_2g083520 1803.1