Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3682 ATGGATTCAACCACAAACATTTCAGATACTTTATGCTCATTGAGGACCTTTGTTCTGCAACCATTTCGTGCGCTGTTGGATTGTTTATTATTATCCAATTTGAGGCAAGGAGACGTAGATTTCAATTCTTCCAAGGACTATAACAACTATCAAAACTATAAATATGACGTGTTCATCAGTTTTAGAGGTGCTGACACCCGCAACAATTTCGTTGATCATCTTTATGATCATCTAGCAAGAAAAGGTATCTTCACCTTCAAGGATGACCAAAGGCTTGAGAAAGGAGAATCCCTTTCGCCACAACTTCAACAAGCAATTCAAAACTCACGGATTTCTATTGTTGTCTTCTCGGCAAGATATGCCAAGTCAACATGGTGTTTGGAGGAGATGGCTGCTATTGCTGAATGCCGGGAAGAATTCAAACAAACAGTTTTCCCTGTTTTTTATGATGTCGATCCATCTCATGTACGAAAACAGACCGGGGTATACCAGAATGACTTTGTTTTACACAAGAAGGAATTCAAACATGACCCAAATAAGGTTATTAGATGGGCGAGAGCTATGGCCGATTTAGCTGAATTAGTTGGTTGGGATGTTAGGAACAAGCCAGAGTTTCGAGAAATCCAAATTATTGTTCAGGAGGTGATAAAAACACTGGGTCATAAATTCTCAGGCTTTGCGGATGACCTTATAGGGATAAATCCTCGAGTAGAAGCAGTAAAAAGTCTTTTGCAACTAAACTCAGAGGATGATGAATTTCGAGTTGTAGGTATTTTAGGGATGGCTGGAATTGGAAAGACAACTATAGCGTCTGTCTTGTATGATAGAATATCCTCTCAGTTTGATGCAAGCTGTTTTATTGAGAATGTAAGCAAAATCTATAGAGATGGTGATGCTATTGCTGTACAAAAACAAATTCTTCGGCAAACTGTAGATGAAATAAATCTAGAGTCATACAGCCCTTCTGAAATATCTGGAATTGTGCGTAAAAGAATGTGCAACAGAAAGTTTCTTGTAGTTCTTGACAATGTTGATATATTAGAGCAAGTGGAAGAATTGGCTATAAATCCTAGATTGCTTGGTACAGGAAGTAGAATGATCATTACAACTAGGAATGCGCATATTCTAAGAGTGTACGAAGAACAGTTATCTTTATCTCATGATAGATGCGTGTCATATGAGGTTCCACTATTGAATAACAATGAGGCTTGCAAACTTTTTTATAGAAAAGCTTCCAAAGGCAAGGATCTCACTAGCGAATGTGTGAATCTTACTAATGAGGTACTAAAATATGCTCAAGGTCTTCCATTAGCAGTTCGAGTTGTGGGTTCTTTCTTGTGTACTCGAAATGTTAACCAGTGGGGAGATGCCATGTATAGATTGAGAAATAATCCAGATAACAAAGTTATGGATGTACTTAAGGTAAGTCTTGAGGGATTACATTCAAATGACAAAGAAATATTTCTGCATATTGCATGTTTCTTTAAAGGGGAGAAGGAAGATTATGTCAAGAGAATTCTAGATGCATGTGGGTTGCATCCTCATTTTGGAATTCAAAATTTGATTGAGAGGTCACTCATAACTATTAGAAATCAGAAAATTCATATGCATGAAATGGTGCAAGAATTGGGGAAGAAAATTGTTCGGCAACAGTTTCTTGATGAACCGGGATCTTGGAGTAGATTGTGGCTTTATGATGATTTCTACCATGTCATGATGACTGAAACGGGAACAAACAAGGTTAAAGCCATCATTCTAGATCAAAAAGAGCATATCTCTGAATATCCTCTGTTGAGGGCTGAAGGATTGTCAATAATGAGGGGACTTAAAATTCTTATATTATACAACGAGAAATTCTCAGGAAGTCTCAGTTTTCTCTCTAACAGATTGCAGTATCTTATGTGGTATGGTTACCCTTTTGCTTCTTTGCCATTAAATTTTGAGCCGTTTTGTCTCGTTGAATTGAATATGCCTTGTAGCAGTATTCAAAGACTATGGGATGGTCAGAAGTATCTCCCTTTATTGAAAAGGGTGGATCTGAGCAACTCCAAATATCTTGTGGAGTCTCCAAATTTTGCTGGAAGCCCGAGACTTGAGCGGCTAGATCTTACAGGATGCATAAACCTATCGTATGTCCATCCATCCATTGGGATGCTGGTAAAACTTTCTTTCTTGAGTTTGGAAGGTTGCAGCAGTTTGGTCAGGCTTGTTCATGATGGTGACACTGTATTTAACTTACTTTCTCTCAAAGTTCTGCATCTCTCCGGCTGCACAAAACTTAAAACCTTATTAGATTTTACAGGGGTGTCAAATCTTGAGTATCTTGATATTGATCAATGTCCGAGTTTATCAATGATTGATCATTCTATTGGGCATCTTACACAGCTTAAATTCTTGAGTTTAAGAGACTGCACGAATCTTGTTAGTATACCAGAAAGCATTAATTCTTTGACTTCTCTTGTAACTCTAGATTTATGTGGCTGCTTAAAACTAGAGAATCTACCCTTGCTGGAAAGTCTACCAGTGTTTGAAGAAAGTAATGACTTCATATCAGTGTCTTCCGTAAATGTTGATCTCTCCAATGGTGAACTTGTATCACCTTACTGTCTGGACTCTTTGATTTTTTTGGACCTAAGCTTTTGCAATCTAAGTATACTCCCTGATGCTATTGGAGAGTTGAGGCATTTAGAAAGGCTAAATCTTGAAGGAAACAACTTTGTTTCACTACCATCTTCAATGAGTAGTCTTTTCAGTCTAGCATATTTAAACTTGGCACATTGCAGCAAGCTTCAATCTTTGCCGGAGCTACGATTCTGTGCCACTTCTTCATCTGGGGGAAGGTATTTCAAAATGGTATCCGGATCTTATAATCATAGATCAGGATTATATATTTTCAACTGCCCCCTCTTGGAGATCGCAGAAGGTCAAAACATGGCACTTTCGTGGCTGGTGAAGTTAATTAAGAATCCTTGTCATTTCCGGTGTGGCCTTGACATTGTTGTACCTGGGTGCACAGTTCCACGGTGGTTTTATCATCAATTTACAGAAAATTCAAGACTACGGATAACAGACTATATGACTGAGTTTGATGATTGGCTTGGCTTTGCCTTTTGTGTGGCATTTGTTGAAAACTATCGTCCAACCACTTCTGGTTATTCTCTTTATCTTTCTTTTGCAAGTGAACAAACGGAAGAAACCTTCGATATACCAATTCGGTTAAACCTGAACGACGTTGATGGCTCAGATGAAGAGCATTTATGGCTAATCTATATCTCTAGGACCCACTGCCATTTTGTAACAACAGGAGCACAAATCACGTTTAAAGCTCACCCAGGTTTGCTAATAAAACAATGGGGATTGCGCATGGTTATGAAGCATGATATCGATGACTACAGTCCATTTGATTCGTGGACAAATGGAATTCATCAACAAGACTATCTTGGCCTAGATCATGCTCATGAAAGCAGCAGCTGCAGGCCTGAAATCCAACTTCCTTATAATTGGTATGAAGCTGAGGAAGAGATGAAGCCTAAAGTCCAGCTTCGTTATAATTGGCATGTATCCGAAGAAGAGGAATACGAGAATAGGGAAGCGAATGTGGAACAAAGTCATCTCTCAGACATGGGCCTTATCACGTAG 3639 0.3864 MDSTTNISDTLCSLRTFVLQPFRALLDCLLLSNLRQGDVDFNSSKDYNNYQNYKYDVFISFRGADTRNNFVDHLYDHLARKGIFTFKDDQRLEKGESLSPQLQQAIQNSRISIVVFSARYAKSTWCLEEMAAIAECREEFKQTVFPVFYDVDPSHVRKQTGVYQNDFVLHKKEFKHDPNKVIRWARAMADLAELVGWDVRNKPEFREIQIIVQEVIKTLGHKFSGFADDLIGINPRVEAVKSLLQLNSEDDEFRVVGILGMAGIGKTTIASVLYDRISSQFDASCFIENVSKIYRDGDAIAVQKQILRQTVDEINLESYSPSEISGIVRKRMCNRKFLVVLDNVDILEQVEELAINPRLLGTGSRMIITTRNAHILRVYEEQLSLSHDRCVSYEVPLLNNNEACKLFYRKASKGKDLTSECVNLTNEVLKYAQGLPLAVRVVGSFLCTRNVNQWGDAMYRLRNNPDNKVMDVLKVSLEGLHSNDKEIFLHIACFFKGEKEDYVKRILDACGLHPHFGIQNLIERSLITIRNQKIHMHEMVQELGKKIVRQQFLDEPGSWSRLWLYDDFYHVMMTETGTNKVKAIILDQKEHISEYPLLRAEGLSIMRGLKILILYNEKFSGSLSFLSNRLQYLMWYGYPFASLPLNFEPFCLVELNMPCSSIQRLWDGQKYLPLLKRVDLSNSKYLVESPNFAGSPRLERLDLTGCINLSYVHPSIGMLVKLSFLSLEGCSSLVRLVHDGDTVFNLLSLKVLHLSGCTKLKTLLDFTGVSNLEYLDIDQCPSLSMIDHSIGHLTQLKFLSLRDCTNLVSIPESINSLTSLVTLDLCGCLKLENLPLLESLPVFEESNDFISVSSVNVDLSNGELVSPYCLDSLIFLDLSFCNLSILPDAIGELRHLERLNLEGNNFVSLPSSMSSLFSLAYLNLAHCSKLQSLPELRFCATSSSGGRYFKMVSGSYNHRSGLYIFNCPLLEIAEGQNMALSWLVKLIKNPCHFRCGLDIVVPGCTVPRWFYHQFTENSRLRITDYMTEFDDWLGFAFCVAFVENYRPTTSGYSLYLSFASEQTEETFDIPIRLNLNDVDGSDEEHLWLIYISRTHCHFVTTGAQITFKAHPGLLIKQWGLRMVMKHDIDDYSPFDSWTNGIHQQDYLGLDHAHESSSCRPEIQLPYNWYEAEEEMKPKVQLRYNWHVSEEEEYENREANVEQSHLSDMGLIT* 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3682 1212 Gene3D - 52 225 IPR035897 -
Tpr7g3682 1212 SMART till_3 54 194 IPR000157 GO:0007165
Tpr7g3682 1212 PRINTS Disease resistance protein signature 255 270 - -
Tpr7g3682 1212 PRINTS Disease resistance protein signature 331 345 - -
Tpr7g3682 1212 PRINTS Disease resistance protein signature 432 446 - -
Tpr7g3682 1212 PRINTS Disease resistance protein signature 744 760 - -
Tpr7g3682 1212 Gene3D Ribonuclease Inhibitor 741 845 IPR032675 -
Tpr7g3682 1212 Gene3D Ribonuclease Inhibitor 846 986 IPR032675 -
Tpr7g3682 1212 Pfam C-JID domain 1002 1128 IPR045344 -
Tpr7g3682 1212 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 227 491 IPR027417 -
Tpr7g3682 1212 SUPERFAMILY L domain-like 603 995 - -
Tpr7g3682 1212 SUPERFAMILY Toll/Interleukin receptor TIR domain 50 197 IPR035897 -
Tpr7g3682 1212 SMART LRR_typ_2 870 891 IPR003591 -
Tpr7g3682 1212 SMART LRR_typ_2 893 916 IPR003591 -
Tpr7g3682 1212 Gene3D - 227 385 IPR027417 -
Tpr7g3682 1212 Pfam NB-ARC domain 237 465 IPR002182 GO:0043531
Tpr7g3682 1212 Gene3D Ribonuclease Inhibitor 563 740 IPR032675 -
Tpr7g3682 1212 Gene3D - 397 481 IPR042197 -
Tpr7g3682 1212 Pfam TIR domain 54 219 IPR000157 GO:0007165
Tpr7g3682 1212 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 761 839 IPR044974 GO:0006952
Tpr7g3682 1212 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 61 761 IPR044974 GO:0006952
Tpr7g3682 1212 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 869 956 IPR044974 GO:0006952
Tpr7g3682 1212 SUPERFAMILY "Winged helix" DNA-binding domain 467 571 IPR036390 -
Tpr7g3682 1212 ProSiteProfiles TIR domain profile. 53 219 IPR000157 GO:0007165
Tpr7g3682 1212 Pfam Leucine Rich Repeat 651 669 IPR011713 -
Tpr7g3682 1212 PANTHER TMV RESISTANCE PROTEIN N-LIKE 761 839 - -
Tpr7g3682 1212 PANTHER TMV RESISTANCE PROTEIN N-LIKE 61 761 - -
Tpr7g3682 1212 PANTHER TMV RESISTANCE PROTEIN N-LIKE 869 956 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3682 Tpr-Chr7 45570798 45576314 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3682 742 935 WRKY Transcription Factor Family AT4G12020 28.718 7.43e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3682 - - mtr:MTR_2g083520 1771.9