Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3681 ATGCAAAATACAATGAGTTTCGCACATTCTTTCGACGAGGCAATAGATTTTGTGAAGAAAGTAAGAATGGAGTTTGCAGATGATAGGGAAAAGTATACTGAGTTTCTTACAATCCTAAATGATTATGCTCGGAGTGTTACTGATTTAAGAGGCACAATAGCAAGGATGGAGGAGCTGCTTAAAGGGCATAAACATTTGATCATCACATTCAGAACCTTCCTGCCGAAGGAACCTCAAATCACACTTGACGGTAACGATGATGATAAGGCTGGTGAAGCAAAAATCGAACACCTTGAAAGAAAGTTATTAGACATTAATCTTAGAAGTAGGATTTAG 336 0.378 MQNTMSFAHSFDEAIDFVKKVRMEFADDREKYTEFLTILNDYARSVTDLRGTIARMEELLKGHKHLIITFRTFLPKEPQITLDGNDDDKAGEAKIEHLERKLLDINLRSRI* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3681 111 Gene3D Paired amphipathic helix 13 75 IPR036600 GO:0006355
Tpr7g3681 111 ProSiteProfiles PAH domain profile. 7 77 IPR003822 GO:0006355
Tpr7g3681 111 Pfam Paired amphipathic helix repeat 30 74 IPR003822 GO:0006355
Tpr7g3681 111 PANTHER SIN3B-RELATED 10 86 IPR039774 GO:0003714
Tpr7g3681 111 SUPERFAMILY PAH2 domain 9 77 IPR036600 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3681 13 87 WRKY Transcription Factor Family AT4G12020 44.000 6.22e-15 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr7g3681 PAH 2.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3681 - K11644 aly:9309770 76.6405