Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3680 ATGATTTGTTTTATTTATCTCCGCCACTTCCTATATGCACGAAAAGATGCTTTACTCTCACTGAGAACCTTTGTCCTGCAACCGTTTCGTGCCCTGTTGAGTCGTTTGTCGTTTTCCAATTTGAGGCAAGGAGTTGAAGCTTCCAATTCCTCCATGGACTATAATAACTATCAAAGCTATAAATATGATGTGTTCATCAGTTTTAGAGGTCCTGACACCCGCAATACTTTTGTTGATCATCTTTATGCTCATCTAACTTCAAAGGGTATTTTTGCCTTCAAGGATGATAAAAGGCTTGAGAAAGGGGAATCCCTTTCGCCGCAGCTTCTGCAAGCAATTAAAAATTCTCGGATTTCTATAGTTGTTTTCTCTGAAAGATATGCTGAGTCAACATGGTGTTTGGAAGAAATGGCTACTATTGCTCAATGTCGTAAAGATTTGAAACAGACTGTTTTCCCTGTTTTTTATGATATCGATCCATCTCTTGTACGAAAACAGACTGGGGTGTATGAGAATGCTTTTCTTTCACACATGAAAAAATTCAAACATGATCATAATAAAGTTTTGAGATGGTCGAGAGCTATGGTTGATTTAACTGAAGTAGTTGGTTGGGATGTTAGGAACAAGCCAGAGTTTCGAGAGATTAAAAATATTGTTCAGGAGGTAATAAAATTATTGGGTCATAAGTTCTCAGGGTTTGCTGAGGACCTTATTGGGATACAACCACGAGTAGAAGAATTAGAAAGCCTTCTGAAATTAAACTCAAAGGATGATGAATTTCGAGCTATAGGTATTTGGGGGATGGCTGGAATTGGAAAGACAACTCTTGCTTCCGTCTTGTATGATAGAGTCTCCTATCAGTTTAATGCAAGCTGTTTTATTGAGAATGTAAGCAAAATCTATAAAGACGGTGGTGCTACTGCTGTAAAGAAACAAATCCTTCGGCAAACCATAGATGAGAAAAACCTAGAGACATACAGCCCTTCTGAAATATCTGGAATCGTACATAAAAGACTTCGCAACAGGAAGTTTCTTGTAGTTCTTGACAATGTAGATCTATTAGAGCAGATGGAAGAGTTGACTATAAATCCTGAGTTGCTTGGTAAAGGAAGTAGAATGATCATTACAACCAGGGATATGCATATTCTAAGAGTGTTTGGAGCACGGTTACCAATATCATATGATGTGTATGAGGTTCCACTATTGAATAGTAATGACGCTCGCGAACTTTTTTATAGAAATGCTTTCAAAGGTGAGGGTCCCTCGAGCAGATGTGTGAAGCTGACTCCTGAGGTACTAAAATATGCTCAAGGTCTTCCATTAGCAGTTCGAGTAGTGGGTTCTTTCTTGTGTACTCGAAATGCTGACCAATGGAAAGATGCTTTGAGCAGATTGAGGAAAAATCCAGACAACAAAGTTATGGAAGTGCTTCAGGTAAGTTTTGAGGGATTGCATTCTGAAGAAAAAGAAATATTTCTGCACATTGCTTGTTTCTTTAAAGGAGAGAAGGAAGATTATGTGAAGCGAATTCTAGATGCTTGTGGGTTGCACCCTCACATTGGAATTCCAAGTTTGATTGAGAGGTCACTCATAACCGTTATAAATCAAGAAATTCTTATGCATGAAATGTTGCAAGACTTGGGGAAGAAAATTGTTCGGCAACAATTTCCTTTCCAACCTGGATCATGGAGTAGATTGTGGCTGTATGACGATTTTTACTCTGTCATGATGACAGAAACGGGAACAAACAATGTTAATGCCATAATTCTAGACCAAAAAGTGCATATCTCTGAACATCGTCGGTTGAGGGCTGAAGGATTGTCAATAATGAGGGGACTTAAAATTCTTATATTGTATCATACAAAATTTTCAGGAAGTCTCAATTTCCTTTCTAACAGCTTGCAGTATCTTCTGTGGTTTAGTTACCCTTTTGCTTCTTTGCCATTAAATTTTGAGCCTTATTGTCTTGTTGAATTGAACATGCCTTGTAGCAGCATCCAGCGACTTTGGGACGGTCACAAGGATCTCCCTTGTTTGAAAAGGGTGGATCTGAGCAACTCCAAATTACTTGTAGAGACTCCAAATTTTGCTGGAAGCCGAAGACTTGAGCGACTAGATTTTACAGGATGCGTAAACCTGTCGTATGTCCATCCGTCCATTGGACTTCTTGAAAAACTTGCTTTCTTGAGTTTGGAAGGCTGCAGCAGTTTGGTCAGGCTAGTTCTTGATGGTGACACTGTATTTAACTTATATTCTCTCAAAGTTCTGCACCTCTCTGGCTGCTCAAAACTCGAAACCATACCAGATTTTACCAGGGTCTCAAATCTGGAGTATCTTGATATTGATCAATGTGCGAGTTTATCAACAATTGATCATTCTTTTGGGGATCTTCTACAACTTAAATTCTTGAGCTTAAGACACTGCACGAATCTTGTCAGTATACTCAAAATCTTAAATTCTATGCCTTCTCTTGTAACTATAGATTTATGTGGCTGCTTAAAACTAGAGAATCTACCCTTGTTTGCAAACACCTCGTTCTCTGAAGAAAGTACTGACATCATATTTGCAACTGCAGAAAATATTGATCTCTCTATATCTTCTTTAAATCTGAATTTTTTGATTTTTTTGGACCTGAGCTTCTGCAATCTAAGTATAGTCCCTGATGCTATTGGATATCTATGGCATTTAGAAAGGCTAAATCTTGAAGGAAACAACTTTGTTTCCCTACCATCTTCAATAGGGAGGCTTTCCAGTCTAGCATATTTAAACTTGGCGCATTGCAGCAGGCTTCAATATTTGCCGGAGCTCCAAGACTGTGCTACTTCTACATCTGGGGGAAGGTATTTCAAAATGGTATCCGGATCTCACGATCATAGGTCAGGATTTTATTTTTTCAACTGCCCCCTCTTGGAGATTGCAGAAGGTCATAAGTTGGCACTTTCGTGGCTTAGGAAATTACTTAAGAGTCCTTGTCATTTCCGGTGTGGCCTTGACATTGTTGTTCCCGGTAACACAATTCCACAATGGTTACCTCATCAATTTACGGCAAATTCAAGAATAAGGATAACAGACTGTGTTAATGAGTTTGACAATTGGCTTGGCTTTTCCTTTTGTGTGACATTTGTAGAATTTCATTCAACAACTTCTGGTTCATATTATCCATTTTCATCACAACTTCCATATCCTCTTTATCTTTCTTTCGAAAGTGAACAAATGGAAGAAACCTTTGATATACCAATTCGGTTAGACCGAAACGATGTTGATGGCTCAGATGCAGAATATTTATGGCTAATCTATATCTCTAGGTCCCACTGCCATTTTGTGACTACAGGAGCACAAATCACGTTTAAAGCTCGCCCAGGTTTGGTGATAACACAATGGGGATTGCGCATGGTTATGGAGCATGATATTATCGATCCATTTGATTTGTGGATAAATGGAGTTCATAAACAAGAATATCTTGGCCTAGATCATGTACATGAAAGCAGCAGCAGCAGCAGGCCTGAAATCCAATTTCCTTATAATTGGTATGAAGCTGTGGAAGAGATAAAGCCTAAAGTCCAGCTTCGTTATAACTGGCATGTTACTGAGGATGAGGAAATCGAGAATAGGGAAGTGAATGTTAAACAAAGTCATCTCTCGGATATGGGCCTTACCACAGCCGATGATTATCAGGACTTACCTCAAAAGTCTCTTCAATGA 3702 0.3884 MICFIYLRHFLYARKDALLSLRTFVLQPFRALLSRLSFSNLRQGVEASNSSMDYNNYQSYKYDVFISFRGPDTRNTFVDHLYAHLTSKGIFAFKDDKRLEKGESLSPQLLQAIKNSRISIVVFSERYAESTWCLEEMATIAQCRKDLKQTVFPVFYDIDPSLVRKQTGVYENAFLSHMKKFKHDHNKVLRWSRAMVDLTEVVGWDVRNKPEFREIKNIVQEVIKLLGHKFSGFAEDLIGIQPRVEELESLLKLNSKDDEFRAIGIWGMAGIGKTTLASVLYDRVSYQFNASCFIENVSKIYKDGGATAVKKQILRQTIDEKNLETYSPSEISGIVHKRLRNRKFLVVLDNVDLLEQMEELTINPELLGKGSRMIITTRDMHILRVFGARLPISYDVYEVPLLNSNDARELFYRNAFKGEGPSSRCVKLTPEVLKYAQGLPLAVRVVGSFLCTRNADQWKDALSRLRKNPDNKVMEVLQVSFEGLHSEEKEIFLHIACFFKGEKEDYVKRILDACGLHPHIGIPSLIERSLITVINQEILMHEMLQDLGKKIVRQQFPFQPGSWSRLWLYDDFYSVMMTETGTNNVNAIILDQKVHISEHRRLRAEGLSIMRGLKILILYHTKFSGSLNFLSNSLQYLLWFSYPFASLPLNFEPYCLVELNMPCSSIQRLWDGHKDLPCLKRVDLSNSKLLVETPNFAGSRRLERLDFTGCVNLSYVHPSIGLLEKLAFLSLEGCSSLVRLVLDGDTVFNLYSLKVLHLSGCSKLETIPDFTRVSNLEYLDIDQCASLSTIDHSFGDLLQLKFLSLRHCTNLVSILKILNSMPSLVTIDLCGCLKLENLPLFANTSFSEESTDIIFATAENIDLSISSLNLNFLIFLDLSFCNLSIVPDAIGYLWHLERLNLEGNNFVSLPSSIGRLSSLAYLNLAHCSRLQYLPELQDCATSTSGGRYFKMVSGSHDHRSGFYFFNCPLLEIAEGHKLALSWLRKLLKSPCHFRCGLDIVVPGNTIPQWLPHQFTANSRIRITDCVNEFDNWLGFSFCVTFVEFHSTTSGSYYPFSSQLPYPLYLSFESEQMEETFDIPIRLDRNDVDGSDAEYLWLIYISRSHCHFVTTGAQITFKARPGLVITQWGLRMVMEHDIIDPFDLWINGVHKQEYLGLDHVHESSSSSRPEIQFPYNWYEAVEEIKPKVQLRYNWHVTEDEEIENREVNVKQSHLSDMGLTTADDYQDLPQKSLQ* 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3680 1233 SUPERFAMILY "Winged helix" DNA-binding domain 471 575 IPR036390 -
Tpr7g3680 1233 SMART till_3 61 201 IPR000157 GO:0007165
Tpr7g3680 1233 Pfam TIR domain 61 224 IPR000157 GO:0007165
Tpr7g3680 1233 PRINTS Disease resistance protein signature 262 277 - -
Tpr7g3680 1233 PRINTS Disease resistance protein signature 338 352 - -
Tpr7g3680 1233 PRINTS Disease resistance protein signature 436 450 - -
Tpr7g3680 1233 PRINTS Disease resistance protein signature 748 764 - -
Tpr7g3680 1233 Gene3D - 401 485 IPR042197 -
Tpr7g3680 1233 Pfam NB-ARC domain 252 481 IPR002182 GO:0043531
Tpr7g3680 1233 Gene3D - 58 232 IPR035897 -
Tpr7g3680 1233 SUPERFAMILY Toll/Interleukin receptor TIR domain 55 204 IPR035897 -
Tpr7g3680 1233 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 54 765 IPR044974 GO:0006952
Tpr7g3680 1233 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 767 1044 IPR044974 GO:0006952
Tpr7g3680 1233 Gene3D - 233 389 IPR027417 -
Tpr7g3680 1233 Gene3D Ribonuclease Inhibitor 849 972 IPR032675 -
Tpr7g3680 1233 Gene3D Ribonuclease Inhibitor 747 848 IPR032675 -
Tpr7g3680 1233 ProSiteProfiles TIR domain profile. 60 226 IPR000157 GO:0007165
Tpr7g3680 1233 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 54 765 - -
Tpr7g3680 1233 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 767 1044 - -
Tpr7g3680 1233 Pfam Leucine Rich Repeat 655 672 IPR011713 -
Tpr7g3680 1233 SUPERFAMILY L domain-like 607 992 - -
Tpr7g3680 1233 Gene3D Ribonuclease Inhibitor 570 746 IPR032675 -
Tpr7g3680 1233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 234 495 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3680 Tpr-Chr7 45556161 45571006 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3680 746 935 WRKY Transcription Factor Family AT4G12020 29.319 1.67e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3680 - - mtr:MTR_2g083520 1782.69